• Bugs with R2025a version

• Add bull eye graph
• Add Average profiles
• Add gaussian filter for density contours
• Add Z-Score logic

• Update IMF/RMF logic

• Fix min/max calculations

• Misspelling errors: euclidianNCones -> euclideanNCones; _austosave -> _autosave
  • If you are using the EuclidianNCones class from Cone Mapper App, then either make a backup copy of the class, or change naming in your scripts to the EuclideanNCones.
  • euclidianNCones in Cone Mapper is supported only for reading from file.
  • For loading EuclideanNCones density data use the next code, because new Cone Mapper version will be saving updates only as euclideanNCones.

    filename = "BAKblabla.mat"
    variableInfo = who('-file', filename);
  
    % support an old "misspelled" version
    if ismember('euclidianNCones', variableInfo)
        load(filename, 'euclidianNCones');
        euclideanNCones = euclidianNCones;
    elseif ismember('euclideanNCones', variableInfo)
        load(filename, 'euclideanNCones');
    end
  
    % do something with euclideanNCones 
  

• EuclidianNCones class has been deleted. EuclideanNCones class has been added.

Deleted:

• Unnecessary versions of CNN
• Unit settings window
• Density contour settings window
• Density properties window

New features:

• Completely redesigned interface
• Add Retinal Magnification Factor
• Add colorbar
• Add micrometers and millimeters
• Add new RMF/IMF save logic
• Add ability to set custom limits for density map
• Add FCN (from Patrick Hähn)
• Add manual annotatioin of rods
• Add to NNDmean new fields: std, min, max values and maps

Updated:

• Scalebar appearance. Now can change the color
• Code structure
• Documentation
• Hot keys with numbers now work only with Ctrl button

Fixed:

• UI bugs
• String formats of messages
• Loosing density handler bug

New features:

• Add Density calculations (Euclidian N Cones, Nearest Neighbor mean, Yellots Rings)
• Add Statistics window
• Add Scalebar
• Add Documentation
• Add Units settings

Fixed:

• Errors of the UI
• Saving file errors

• Add colormaps for voronoi diagram
• Add import/export for .csv format
• Add old format reading

• "Bounding box" has been deleted.
• "Compare with" function has been deleted.
• "Mosaic" has been deleted.
• Test algorithm of improving cones after CNN (by distance model) has been deleted.
• Edit mode has been removed.

• "Empty" view of Voronoi Diagram (polygons is not filled by color).
• Voronoi Diagram is now works with every view feature of ConeFinder.
• Cones can be edited during Voronoi Diagram presentation. Changes will be applyed to diagram immediately.
• Minimap has been added.
• Info label has been added. Now you can see live time coordinates and pixel value under cursor.

• Hotkeys now work all time (not only Edit mode).
• Pan and Zoom tools was updated.
• All switchers in the interface were changed to check boxes.
• View logic was updated. Current presentation order: Image -> Log filter -> Laplacian of Gaussian -> Voronoi Diagram -> Conelocations -> Grid
• Voronoi Diagram performance has been improved.
• Everything in the code was adjusted to Matlab 2021a version.
• Filename and cones info now in the window title.

• Fixed bugs when you choose nothing in dialog windows.
• Fixed bugs with grid presentation (orientation, was not working with large not sqare images).
• Fixed bugs with overlaping during CNN recognition.
• Fixed "Delete doubles" function. Not it is working with large numbers of cones.
• Fixed Voronoi Diagram color map scaling.
• Fixed remember last used path for fileopengui.
• Fixed button labeling.