Package: dMod

Type: Package

Title: Dynamic Modeling and Parameter Estimation in ODE Models

Version: 1.2.0

Date: 2020-02-10

Author: Daniel Kaschek

Maintainer: Daniel Kaschek <[email protected]>

Description: The framework provides functions to generate ODEs of reaction

networks, parameter transformations, observation functions, residual functions,

etc. The framework follows the paradigm that derivative information should be

used for optimization whenever possible. Therefore, all major functions produce

and can handle expressions for symbolic derivatives.

License: GPL (>= 2)

Depends:

cOde (>= 1.1)

Imports:

deSolve,

rootSolve,

ggplot2,

parallel,

stringr,

plyr,

dplyr,

foreach,

doParallel,

rjson,

stringr,

crayon,

yaml,

rlang,

data.table,

purrr,

CppODE,

abind,

einsum,

optimx,

nleqslv,

reticulate,

BH

Remotes:

simonbeyer1/CppODE

Suggests:

MASS,

pander,

knitr,

rmarkdown,

RoxygenNote: 7.3.3

Encoding: UTF-8

Roxygen: list(markdown = TRUE)