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Commits on Jun 13, 2019

• Add sequence_handling scripts

  Aerin13

  committed
  faddc6d

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Commits on Feb 8, 2019

• change hist to boxplot and fix italics/subscript

  ChaochihL

  committed
  4710d7d

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• add execute permissions to scripts

  ChaochihL

  committed
  84d9e77

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• script that generates supplemental figure

  ChaochihL

  committed
  2bcdd33

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Commits on Feb 6, 2019

• add slash to fix path

  ChaochihL

  committed
  c10c2c7

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• create sub dir within script

  ChaochihL

  committed
  6db5b23

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• add code to save original SNP and representative SNP names to file

  ChaochihL

  committed
  53ce051

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Commits on Nov 19, 2018

• updated

  ChaochihL

  committed
  9ede3d1

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• updated

  ChaochihL

  committed
  e475070

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Commits on Nov 18, 2018

• fix python module call

  ChaochihL

  committed
  d07bd35

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Commits on Nov 16, 2018

• re-run ld analysis on new set of SNPs for gwas and fst outliers analysis

  ChaochihL

  committed
  7413be5

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Commits on Sep 4, 2018

• remove Data dir

  

  LiLei

  committed
  aa310b1

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Commits on Sep 2, 2018

• remove directory that we never ended up using

  ChaochihL

  committed
  bc8504f

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• update readme for LD analysis

  ChaochihL

  committed
  f72bd05

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• renamed to LD_analysis_gwas.sh

  ChaochihL

  committed
  e32a6b9

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• remove redundant code already stored in another script and turn into job script

  ChaochihL

  committed
  1d0d8a3

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• setup similarly to fstOutlier LD analysis script, safer on mesabi system

  ChaochihL

  committed
  0821fcb

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• updates

  ChaochihL

  committed
  925065a

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• add submodule for SNP_Utils

  ChaochihL

  committed
  4f45219

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• merge Plot dir and Figures dir into one

  ChaochihL

  committed
  0c1fb86

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• rename directory

  ChaochihL

  committed
  a5c62b4

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• add description of repo setup

  ChaochihL

  committed
  6db47ae

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• reorganize - put job scripts in appropriate dir

  ChaochihL

  committed
  2a22a10

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• rename & setup job scripts for gwas gene intervals same as fst gene intervals

  ChaochihL

  committed
  a8e344c

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• fix comments

  ChaochihL

  committed
  1090fa8

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• rename fst_gene_intervals.sh script to gene_intervals.sh

  ChaochihL

  committed
  687b929

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• correct comments

  ChaochihL

  committed
  d948cf9

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• change name of fst_gene_intervals.sh script to gene_intervals.sh

  ChaochihL

  committed
  97e2d90

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Commits on Aug 30, 2018

• update text sizes

  ChaochihL

  committed
  f33c611

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Commits on Aug 28, 2018

• re-run ld fst outliers analysis 50% missingness 99th percentile

  ChaochihL

  committed
  990a7c6

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Commits on Aug 27, 2018

• re-run fst outliers LD analysis with 50% missingness threshold

  ChaochihL

  committed
  1068aaf

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Commits on Aug 23, 2018

• change the shape

  lilei1

  authored
  8c36cd6

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Commits on Aug 22, 2018

• comments

  lilei1

  authored
  4fa76ec

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• added the test1

  lilei1

  authored
  e212cc2

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Commits on Aug 19, 2018

• add outliers

  lilei1

  authored
  4fd373c

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