This directory contains the framework used to build all our epidemiological models.

Subdirectories:

• utils: Generic utility functions, i.e. not specific to epidemiological programms.
• io: Utility for writing and reading data to and from files in different formats.
• math: Math utility.
• epidemiology: Classes and functions that are useful in any type of epidemiological model.
• compartments: Classes and functions that can be used to create compartment (i.e. SIR-type) models.
• mobility: Model-independent loose coupling to model mobility between different model instances that represent e.g. geographic regions.