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Docker images for 3D Slicer

Unmaintained Images

In the process of improving the Slicer infrastructure, these images are not updated anymore. Only the slicer/slicer-base image is used for continuous integration with GitHub Actions workflow.

slicer/slicer-dependencies

slicer-dependencies-images An image containing all the dependencies to build Slicer itself: ITK, VTK, CTK, Qt, etc.

slicer/slicer-build

slicer-build-images An image containing a Slicer build tree along with all the dependencies to build Slicer.

slicer/slicer-test

slicer-test-images An image containing a Slicer build and test tree along with all the dependencies to build Slicer.

slicer/slicer-test:opengl

slicer-test-opengl-images An image based on thewtex/opengl:centos which contains configuration files to run Slicer's tests

Usage

To build and package a local Slicer source tree at ~/src/Slicer against pre-built dependencies:

docker run --name slicer slicer/slicer-dependencies
# Copy the generated Slicer package to the /tmp/ directory.
docker cp slicer:$(docker cp slicer:/usr/src/Slicer-build/Slicer-build/PACKAGE_FILE.txt - | tar xO) /tmp/
docker rm slicer

Update

To update the Slicer revision, first download Slicer sources:

git clone https://github.com/Slicer/Slicer

Then download SlicerDocker sources and check out a local branch for the update:

git clone [email protected]:Slicer/SlicerDocker
cd SlicerDocker
git checkout -b update-$(date +%F)

And run the update script:

./slicer-base/update.sh /path/to/src/Slicer