forked from PPPLDeepLearning/plasma-python
-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathlearn.py
More file actions
152 lines (123 loc) · 5.26 KB
/
learn.py
File metadata and controls
152 lines (123 loc) · 5.26 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
'''
#########################################################
This file trains a deep learning model to predict
disruptions on time series data from plasma discharges.
Dependencies:
conf.py: configuration of model,training,paths, and data
builder.py: logic to construct the ML architecture
data_processing.py: classes to handle data processing
Author: Julian Kates-Harbeck, [email protected]
This work was supported by the DOE CSGF program.
#########################################################
'''
from __future__ import print_function
import datetime,time,random
import sys,os
import dill
from functools import partial
import matplotlib
matplotlib.use('Agg')
import numpy as np
import multiprocessing as old_mp
from plasma.conf import conf
from pprint import pprint
pprint(conf)
from plasma.primitives.shots import Shot, ShotList
from plasma.preprocessor.normalize import Normalizer
from plasma.preprocessor.preprocess import Preprocessor, guarantee_preprocessed
from plasma.models.loader import Loader
if conf['model']['shallow']:
from plasma.models.shallow_runner import train, make_predictions_and_evaluate_gpu
else:
from plasma.models.runner import train, make_predictions_and_evaluate_gpu
if conf['data']['normalizer'] == 'minmax':
from plasma.preprocessor.normalize import MinMaxNormalizer as Normalizer
elif conf['data']['normalizer'] == 'meanvar':
from plasma.preprocessor.normalize import MeanVarNormalizer as Normalizer
elif conf['data']['normalizer'] == 'var':
from plasma.preprocessor.normalize import VarNormalizer as Normalizer #performs !much better than minmaxnormalizer
elif conf['data']['normalizer'] == 'averagevar':
from plasma.preprocessor.normalize import AveragingVarNormalizer as Normalizer #performs !much better than minmaxnormalizer
else:
print('unkown normalizer. exiting')
exit(1)
shot_list_dir = conf['paths']['shot_list_dir']
shot_files = conf['paths']['shot_files']
shot_files_test = conf['paths']['shot_files_test']
train_frac = conf['training']['train_frac']
stateful = conf['model']['stateful']
# if stateful:
# batch_size = conf['model']['length']
# else:
# batch_size = conf['training']['batch_size_large']
np.random.seed(0)
random.seed(0)
only_predict = len(sys.argv) > 1
custom_path = None
if only_predict:
custom_path = sys.argv[1]
print("predicting using path {}".format(custom_path))
#####################################################
####################PREPROCESSING####################
#####################################################
shot_list_train,shot_list_validate,shot_list_test = guarantee_preprocessed(conf)
#####################################################
####################Normalization####################
#####################################################
print("normalization",end='')
nn = Normalizer(conf)
nn.train()
loader = Loader(conf,nn)
print("...done")
print('Training on {} shots, testing on {} shots'.format(len(shot_list_train),len(shot_list_test)))
#####################################################
######################TRAINING#######################
#####################################################
#train(conf,shot_list_train,loader)
if not only_predict:
p = old_mp.Process(target = train,args=(conf,shot_list_train,shot_list_validate,loader))
p.start()
p.join()
#####################################################
####################PREDICTING#######################
#####################################################
loader.set_inference_mode(True)
#load last model for testing
print('saving results')
y_prime = []
y_prime_test = []
y_prime_train = []
y_gold = []
y_gold_test = []
y_gold_train = []
disruptive= []
disruptive_train= []
disruptive_test= []
# y_prime_train,y_gold_train,disruptive_train = make_predictions(conf,shot_list_train,loader)
# y_prime_test,y_gold_test,disruptive_test = make_predictions(conf,shot_list_test,loader)
y_prime_train,y_gold_train,disruptive_train,roc_train,loss_train = make_predictions_and_evaluate_gpu(conf,shot_list_train,loader,custom_path)
y_prime_test,y_gold_test,disruptive_test,roc_test,loss_test = make_predictions_and_evaluate_gpu(conf,shot_list_test,loader,custom_path)
print('=========Summary========')
print('Train Loss: {:.3e}'.format(loss_train))
print('Train ROC: {:.4f}'.format(roc_train))
print('Test Loss: {:.3e}'.format(loss_test))
print('Test ROC: {:.4f}'.format(roc_test))
disruptive_train = np.array(disruptive_train)
disruptive_test = np.array(disruptive_test)
y_gold = y_gold_train + y_gold_test
y_prime = y_prime_train + y_prime_test
disruptive = np.concatenate((disruptive_train,disruptive_test))
shot_list_validate.make_light()
shot_list_test.make_light()
shot_list_train.make_light()
save_str = 'results_' + datetime.datetime.now().strftime("%Y-%m-%d-%H-%M-%S")
result_base_path = conf['paths']['results_prepath']
if not os.path.exists(result_base_path):
os.makedirs(result_base_path)
np.savez(result_base_path+save_str,
y_gold=y_gold,y_gold_train=y_gold_train,y_gold_test=y_gold_test,
y_prime=y_prime,y_prime_train=y_prime_train,y_prime_test=y_prime_test,
disruptive=disruptive,disruptive_train=disruptive_train,disruptive_test=disruptive_test,
shot_list_validate=shot_list_validate,shot_list_train=shot_list_train,shot_list_test=shot_list_test,
conf = conf)
print('finished.')