# CAD2 enhancer analysis

Training: 267 positive + 1360 negative

Test: 67 positive + 340 negative

First install the right LedPred version with this command

devtools::install_github('aitgon/LedPred', ref="fca159a783fb8b04bda9fd7e556f19edd5dccb7f")

Run the R commands in this script script.R

## Reference

• Nat Commun. 2015 Apr 15;6:6905. doi: 10.1038/ncomms7905. High-throughput and quantitative assessment of enhancer activity in mammals by CapStarr-seq. Vanhille L1, Griffon A1, Maqbool MA2, Zacarias-Cabeza J3, Dao LT1, Fernandez N4, Ballester B1, Andrau JC2, Spicuglia S1.