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fix rare case in which used easyconfig and copied easyconfig are the same#1159

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boegel merged 5 commits intoeasybuilders:developfrom
boegel:fix_copy_same_file
Feb 7, 2015
Merged

fix rare case in which used easyconfig and copied easyconfig are the same#1159
boegel merged 5 commits intoeasybuilders:developfrom
boegel:fix_copy_same_file

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@boegel boegel commented Feb 6, 2015

error as shown below occurs when installing additional extensions after editing easyconfig located in install dir; this trivial patch fixes it

ERROR: EasyBuild crashed with an error (at easybuild/main.py:135 in build_and_install_software): Traceback (most recent call last):
  File "/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-2.0.0dev-py2.6.egg/easybuild/main.py", line 109, in build_and_install_software
    (ec_res['success'], app_log, err) = build_and_install_one(ec, orig_environ)
  File "/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-2.0.0dev-py2.6.egg/easybuild/framework/easyblock.py", line 1938, in build_and_install_one
    shutil.copy(spec, newspec)
  File "/usr/lib64/python2.6/shutil.py", line 84, in copy
    copyfile(src, dst)
  File "/usr/lib64/python2.6/shutil.py", line 48, in copyfile
    raise Error("`%s` and `%s` are the same file" % (src, dst))
Error: `/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/SL6/sandybridge/software/R/3.1.2-intel-2015a/easybuild/R-3.1.2-intel-2015a.eb` and `/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/SL6/sandybridge/software/R/3.1.2-intel-2015a/easybuild/R-3.1.2-intel-2015a.eb` are the same file

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hpcugentbot commented Feb 6, 2015

Refer to this link for build results (access rights to CI server needed):
https://jenkins1.ugent.be/job/easybuild-framework-pr-builder/1255/
Test FAILed.

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hpcugentbot commented Feb 6, 2015

Refer to this link for build results (access rights to CI server needed):
https://jenkins1.ugent.be/job/easybuild-framework-pr-builder/1258/
Test FAILed.

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hpcugentbot commented Feb 6, 2015

Refer to this link for build results (access rights to CI server needed):
https://jenkins1.ugent.be/job/easybuild-framework-pr-builder/1259/
Test PASSed.

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boegel commented Feb 6, 2015

Jenkins: test this please

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hpcugentbot commented Feb 7, 2015

Refer to this link for build results (access rights to CI server needed):
https://jenkins1.ugent.be/job/easybuild-framework-pr-builder/1261/
Test PASSed.

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boegel commented Feb 7, 2015

obscure issue, bugfix is fairly trivial, so going in

boegel added a commit that referenced this pull request Feb 7, 2015
@boegel
Merge pull request #1159 from boegel/fix_copy_same_file
e280ab0 
fix rare case in which used easyconfig and copied easyconfig are the same
@boegel boegel merged commit e280ab0 into easybuilders:develop Feb 7, 2015
@boegel boegel deleted the fix_copy_same_file branch February 7, 2015 08:59
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