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Commits on May 31, 2020

• Edits

  samhunter

  committed
  b2d7b40

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• Update README.md

  msettles

  authored
  7688f89

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• Merge pull request #212 from ibest/length-template-option-3

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  joe-angell

  authored
  1f6f622

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• Merge branch 'master' into length-template-option-3

  joe-angell

  committed
  21a68cc

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• Merge pull request #216 from ibest/overlapper_readid_fixes

  Show description for a8db2e4
  msettles

  authored
  a8db2e4

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• final updates for this pull request

  msettles

  committed
  89102df

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• add &s

  msettles

  committed
  971b6d7

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Commits on May 30, 2020

• moved sstream to read.h

  msettles

  committed
  747b87e

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• moved include sstring from iohandler to read

  msettles

  committed
  7784b3d

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• Check changes in primer regen data

  msettles

  committed
  1b5d037

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• updates to fix issues in pull request

  msettles

  committed
  20ec60a

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• fixing regression regen for osx

  joe-angell

  committed
  5e63057

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• fixing darwin findarg

  joe-angell

  committed
  111e5a2

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• workarounds for issues with find and zdiff on osx

  joe-angell

  committed
  28950b0

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Commits on May 24, 2020

• forgot semicolon

  msettles

  committed
  5300526

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• comments were being lost when you remove 1 of 2 reads

  msettles

  committed
  f7d8b3a

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• add strjoin to header

  msettles

  committed
  a4cb231

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• Merge branch 'master' into overlapper_readid_fixes

  msettles

  committed
  eed7b66

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Commits on May 22, 2020

• removed all dynamic_casts from output writers

  joe-angell

  committed
  7abbaf9

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• removed dynamic cast from a few more

  joe-angell

  committed
  4801b43

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• remove dynamic casts from adapter trimmer

  joe-angell

  committed
  d368e26

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• more dynamic cast cleanup

  joe-angell

  committed
  b533b29

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Commits on May 20, 2020

• remove dynamic cast from overlapper

  joe-angell

  committed
  e0ed033

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Commits on May 19, 2020

• refactored writer helper, now uses ReadVisitor

  joe-angell

  committed
  04f3421

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Commits on May 18, 2020

• fixing counters so we no longer need use dynamic cast

  joe-angell

  committed
  df2f626

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• changing to shared ptr for read storage

  joe-angell

  committed
  ffd72ce

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Commits on May 13, 2020

• closer to what i originally had in mind

  joe-angell

  committed
  963f5c5

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• proper pointer conversion

  joe-angell

  committed
  3e1ab76

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• example of template specialization

  joe-angell

  committed
  06050be

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• Merge pull request #214 from ibest/regression-uncompressed

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  joe-angell

  authored
  38e72de

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• bad regen

  joe-angell

  committed
  6144d4d

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• adding uncompressed regression so we can test that code path and view the differences easier

  joe-angell

  committed
  2f6464c

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Commits on May 12, 2020

• Merge pull request #213 from ibest/regression-script

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  joe-angell

  authored
  bae960c

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• more missing virtuals

  joe-angell

  committed
  4283a41

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• removing duplicate output writers

  joe-angell

  committed
  48fe934

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