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pyproject.toml
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42 lines (40 loc) · 990 Bytes
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[project]
name = "bio-engine"
version = "0.7.4"
description = "Bioinformatics sidecar engine for PS Analyzer"
authors = [
]
dependencies = [
"fastapi>=0.100.0",
"uvicorn>=0.20.0",
"biopython>=1.80",
"hgvs>=1.5.0",
"psycopg2-binary>=2.9.0", # Using binary for easier install, switch to psycopg2 if needed for prod
"bioutils>=0.6.0",
"pydantic>=2.0.0",
"pydantic-settings>=2.0.0",
"orjson>=3.9.0",
"aiofiles>=23.0.0",
"httpx>=0.24.0",
]
requires-python = ">=3.10"
readme = "README.md"
license = {text = "Proprietary"}
[tool.ruff]
line-length = 120
target-version = "py310"
select = [
"E", # pycodestyle errors
"W", # pycodestyle warnings
"F", # pyflakes
"I", # isort
"B", # flake8-bugbear
"UP", # pyupgrade
]
ignore = []
[tool.ruff.format]
quote-style = "double"
indent-style = "space"
skip-magic-trailing-comma = false
line-ending = "auto"