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<h1 class="title toc-ignore">Tasklist</h1>
</div>
<p>Below are a set of tasks that we will work on in class (either alone or in small groups).</p>
<hr />
<div id="cs_01-create-a-simple-functioning-script" class="section level2">
<h2><a href="./CS_01.html">CS_01 : Create a simple, functioning script</a></h2>
<p>Write a script that reads in data, calculates a statistic, and makes a plot.</p>
<a class="btn btn-link" href="./CS_01.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i1">Preview Readings & Tasks </button>
<div id="i1" class="collapse">
<h2 id="readings">Readings</h2>
<ul>
<li>R4DS <a href="http://r4ds.had.co.nz/introduction.html">Chapter 1</a></li>
<li>R4DS <a href="http://r4ds.had.co.nz/explore-intro.html">Chapter 2</a></li>
<li>Datacamp’s <a href="https://www.datacamp.com/community/tutorials/make-histogram-basic-r"><em>How to Make a Histogram with Basic R</em></a></li>
<li>Datacamp’s <a href="https://www.datacamp.com/community/tutorials/make-histogram-ggplot2"><em>How to Make a Histogram with ggplot</em></a></li>
</ul>
<h2 id="tasks">Tasks</h2>
<ul>
<li>Create a new R script in RStudio</li>
<li>Load the iris dataset with <code>data(iris)</code></li>
<li>Calculate the mean of the <code>Petal.Length</code> field</li>
<li>Plot the distribution of the <code>Petal.Length</code> column as a histogram</li>
<li>Save the script</li>
<li>Click ‘Source’ in RStudio to run it from beginning to end</li>
</ul>
</div>
<hr />
</div>
<div id="tk_01-git-01" class="section level2">
<h2><a href="./TK_01.html">TK_01 : Git-01</a></h2>
<p>Install Git and get organized!</p>
<a class="btn btn-link" href="./TK_01.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i2">Preview Readings & Tasks </button>
<div id="i2" class="collapse">
<h2 id="readings-1">Readings</h2>
<ul>
<li>Chapters <a href="http://r4ds.had.co.nz">1-2 in R4DS</a></li>
<li>Chapters <a href="http://happygitwithr.com/installation-pain.html" target="blank">4-8 in Happy Git and Github for the useR - Installation</a></li>
</ul>
<h2 id="tasks-1">Tasks</h2>
<ul>
<li>Create a <a href="https://github.com/join?source=header-home" target="blank">GitHub account</a> and post your github username <a href="https://goo.gl/forms/wy25GL0YWZIHplDH2">here</a></li>
<li>Install git on your computer</li>
<li>Make sure git works in R-Studio</li>
<li>Sign up for the <a href="https://education.github.com/pack">GitHub Education pack</a></li>
<li>Complete DataCamp Course in <a href="https://www.datacamp.com/courses/introduction-to-r">Introduction to R</a></li>
</ul>
</div>
<hr />
</div>
<div id="cs_02-my-grandfather-says-climate-is-cooling" class="section level2">
<h2><a href="./CS_02.html">CS_02 : My grandfather says climate is cooling</a></h2>
<p>Import data, generate and save a graphic.</p>
<a class="btn btn-link" href="./CS_02.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i3">Preview Readings & Tasks </button>
<div id="i3" class="collapse">
<h2 id="readings-2">Readings</h2>
<ul>
<li>The <a href="https://ggplot2.tidyverse.org/">ggplot2 vignette</a></li>
</ul>
<h2 id="tasks-2">Tasks</h2>
<ul>
<li>Create a new R script in RStudio</li>
<li>Load data from a comma-separated-values formatted text file hosted on a website</li>
<li>Graph the annual mean temperature in June, July and August (<code>JJA</code>) using ggplot</li>
<li>Add a smooth line with <code>geom_smooth()</code></li>
<li>Add informative axis labels using <code>xlab()</code> and <code>ylab()</code> including <a href="https://data.giss.nasa.gov/cgi-bin/gistemp/stdata_show.cgi?id=425003010120&dt=1&ds=5">units</a></li>
<li>Add a graph title with <code>ggtitle()</code></li>
<li>Save a graphic to a png file using <code>png()</code> and <code>dev.off()</code> OR <a href="https://ggplot2.tidyverse.org/reference/ggsave.html"><code>ggsave</code></a></li>
<li>Save the script</li>
<li>Click ‘Source’ in RStudio to run the script from beginning to end to re-run the entire process</li>
</ul>
</div>
<hr />
</div>
<div id="tk_02-git-02" class="section level2">
<h2><a href="./TK_02.html">TK_02 : Git-02</a></h2>
<p>Start using Github to manage course materials</p>
<a class="btn btn-link" href="./TK_02.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i4">Preview Readings & Tasks </button>
<div id="i4" class="collapse">
<h2 id="readings-3">Readings</h2>
<ul>
<li>Chapters <a href="http://r4ds.had.co.nz">3 in R4DS</a></li>
<li>Chapters <a href="http://happygitwithr.com" target="blank">13-15 in Happy Git and Github for the useR - Installation</a></li>
<li>Overview of <a href="https://support.rstudio.com/hc/en-us/articles/200532077-Version-Control-with-Git-and-SVN" target="blank">Using the R-Studio GUI by R-Studio</a></li>
<li>Chapter <a href="http://r4ds.had.co.nz/workflow-projects.html" target="blank">8 R for Data Science - Projects</a></li>
<li>RStudio and <a href="https://www.youtube.com/watch?v=E2d91v1Twcc" target="blank">the Git GUI</a></li>
</ul>
<h2 id="tasks-3">Tasks</h2>
<ul>
<li>Create a new repository for this course by following <a href="https://classroom.github.com/a/etsQwbE7">this link</a>.</li>
<li>Create a new project in Rstudio and connect it to the new repository in GitHub (these are labeled <code>YEAR-GEO503-GITHUBUSERNAME</code>). Helpful instructions are <a href="http://happygitwithr.com/rstudio-git-github.html#clone-the-new-github-repository-to-your-computer-via-rstudio">here</a></li>
<li>Edit the README.md file in your repository to include a brief description of the repository (e.g. “Coursework for Spatial Data Science”).</li>
<li>Stage and Commit your changes to Git (using the git tab in the upper right of RStudio)</li>
<li>Push the repository up to GitHub</li>
</ul>
</div>
<hr />
</div>
<div id="cs_03-wealth-over-time" class="section level2">
<h2><a href="./CS_03.html">CS_03 : Wealth over time</a></h2>
<p>Data wrangling plus more advanced ggplot</p>
<a class="btn btn-link" href="./CS_03.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i5">Preview Readings & Tasks </button>
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<h2 id="readings-4">Readings</h2>
<ul>
<li>The <a href="https://ggplot2.tidyverse.org/" target="blank">ggplot2 vignette</a></li>
<li>R4DS <a href="http://r4ds.had.co.nz/data-visualisation.html" target="blank">Chapter 3 - Data visualization</a></li>
<li>The <a href="https://youtu.be/OwII-dwh-bk" target="blank">Hans Rosling The River of Myths</a></li>
<li>Watch the <a href="https://www.ted.com/talks/hans_rosling_shows_the_best_stats_you_ve_ever_seen" target="blank">Hons Rosling video</a></li>
</ul>
<h2 id="tasks-4">Tasks</h2>
<ul>
<li>Recreate layered graphics with ggplot including raw and transformed data</li>
<li>Save graphical output as a .png file</li>
<li>Save your script as a .R or .Rmd in your course repository</li>
</ul>
</div>
<hr />
</div>
<div id="tk_03-data-wrangling" class="section level2">
<h2><a href="./TK_03.html">TK_03 : Data Wrangling</a></h2>
<p>Data Transformation (Filtering, selecting, transforming)</p>
<a class="btn btn-link" href="./TK_03.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i6">Preview Readings & Tasks </button>
<div id="i6" class="collapse">
<h2 id="readings-5">Readings</h2>
<ul>
<li>Chapters <a href="http://r4ds.had.co.nz">4-5 in R4DS</a></li>
</ul>
<h2 id="tasks-5">Tasks</h2>
<ul>
<li>Quickly describe any functions that seem especially useful in the README.md file for this week.</li>
</ul>
</div>
<hr />
</div>
<div id="cs_04-farthest-airport-from-new-york-city" class="section level2">
<h2><a href="./CS_04.html">CS_04 : Farthest airport from New York City</a></h2>
<p>Joining Relational Data</p>
<a class="btn btn-link" href="./CS_04.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i7">Preview Readings & Tasks </button>
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<h2 id="readings-6">Readings</h2>
<ul>
<li>R4DS <a href="http://r4ds.had.co.nz/relational-data.html" target="blank">Chapter 13 - Relational Data</a></li>
</ul>
<h2 id="tasks-6">Tasks</h2>
<ul>
<li>Join two datasets using a common column</li>
<li>Answer a question that requires understanding how multiple tables are related</li>
<li>Save your script as a .R or .Rmd in your course repository</li>
</ul>
</div>
<hr />
</div>
<div id="tk_04-data-wrangling-2" class="section level2">
<h2><a href="./TK_04.html">TK_04 : Data Wrangling 2</a></h2>
<p>Joining data</p>
<a class="btn btn-link" href="./TK_04.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i8">Preview Readings & Tasks </button>
<div id="i8" class="collapse">
<h2 id="readings-7">Readings</h2>
<ul>
<li>Chapters <a href="http://r4ds.had.co.nz">11-13 in R4DS</a></li>
</ul>
<h2 id="tasks-7">Tasks</h2>
<ul>
<li>Briefly describe functions that seem especially useful in the README.md file for this week.</li>
</ul>
</div>
<hr />
</div>
<div id="cs_05-beware-the-canadians" class="section level2">
<h2><a href="./CS_05.html">CS_05 : Beware the Canadians!</a></h2>
<p>Working with Spatial Data and the sf package</p>
<a class="btn btn-link" href="./CS_05.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i9">Preview Readings & Tasks </button>
<div id="i9" class="collapse">
<h2 id="readings-8">Readings</h2>
<ul>
<li>The <a href="https://r-spatial.github.io/sf/" target="blank">Spatial Features Package (sf)</a></li>
</ul>
<h2 id="tasks-8">Tasks</h2>
<ul>
<li>Reproject spatial data using <code>st_transform()</code></li>
<li>Perform spatial operations on spatial data (e.g. intersection and buffering)</li>
<li>Generate a polygon that includes all land in NY that is within 10km of the Canadian border and calculate the area</li>
<li>Save your script as a .R or .Rmd in your course repository</li>
</ul>
</div>
<hr />
</div>
<div id="tk_05-spatial-vector-data" class="section level2">
<h2><a href="./TK_05.html">TK_05 : Spatial Vector Data</a></h2>
<p>Vector data processing. Integrating ‘traditional GIS’ analyses with statistical modelling. Data intersection, overlays, zonal statistics</p>
<a class="btn btn-link" href="./TK_05.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i10">Preview Readings & Tasks </button>
<div id="i10" class="collapse">
<h2 id="readings-9">Readings</h2>
<ul>
<li>Chapters <a href="https://geocompr.robinlovelace.net/">1-2 in GCR</a></li>
</ul>
<h2 id="tasks-9">Tasks</h2>
<ul>
<li>Quickly describe functions that seem especially useful in the README.md file for this week.</li>
</ul>
</div>
<hr />
</div>
<div id="cs_06-find-hottest-country-on-each-continent" class="section level2">
<h2><a href="./CS_06.html">CS_06 : Find hottest country on each continent</a></h2>
<p>Use sf and raster to quantify maximum temperature for each country and then identify the hottest one on each continent.</p>
<a class="btn btn-link" href="./CS_06.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i11">Preview Readings & Tasks </button>
<div id="i11" class="collapse">
<h2 id="readings-10">Readings</h2>
<ul>
<li>Raster Vector Interactions <a href="https://geocompr.robinlovelace.net/geometric-operations.html#raster-vector" target="blank">GCR</a></li>
</ul>
<h2 id="tasks-10">Tasks</h2>
<ul>
<li>Calculate annual maximum temperatures from a monthly spatio-temporal dataset</li>
<li>Remove Antarctica from the <code>world</code> dataset</li>
<li>Summarize raster values within polygons</li>
<li>Generate a summary figure and table.</li>
<li>Save your script as a .R or .Rmd in your course repository</li>
</ul>
</div>
<hr />
</div>
<div id="tk_06-spatial-raster-data" class="section level2">
<h2><a href="./TK_06.html">TK_06 : Spatial Raster Data</a></h2>
<p>Gridded spatial data</p>
<a class="btn btn-link" href="./TK_06.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i12">Preview Readings & Tasks </button>
<div id="i12" class="collapse">
<h2 id="readings-11">Readings</h2>
<ul>
<li>Chapters <a href="https://geocompr.robinlovelace.net/">3-4 in GCR</a></li>
</ul>
<h2 id="tasks-11">Tasks</h2>
<ul>
<li>Quickly describe functions that seem especially useful in the README.md file for this week.</li>
</ul>
</div>
<hr />
</div>
<div id="cs_07-getting-help" class="section level2">
<h2><a href="./CS_07.html">CS_07 : Getting Help!</a></h2>
<p>Learning more about finding help</p>
<a class="btn btn-link" href="./CS_07.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i13">Preview Readings & Tasks </button>
<div id="i13" class="collapse">
<h2 id="readings-12">Readings</h2>
<ul>
<li>How to <a href="http://adv-r.had.co.nz/Reproducibility.html">write a reproducible example</a></li>
<li>Using <a href="https://reprex.tidyverse.org/">Reprex package</a></li>
</ul>
<h2 id="tasks-12">Tasks</h2>
<ul>
<li>Learn how to read R help files effectively</li>
<li>Learn how to search for help</li>
<li>Learn how to create a Minimum Working Example (MWE)</li>
<li>Debug existing code</li>
<li>Save your reprex to your course repository as an html file using Export -> “Save As Webpage” in the RStudio “Viewer” Tab.</li>
</ul>
</div>
<hr />
</div>
<div id="tk_07-project-proposal" class="section level2">
<h2><a href="./TK_07.html">TK_07 : Project Proposal</a></h2>
<a class="btn btn-link" href="./TK_07.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i14">Preview Readings & Tasks </button>
<div id="i14" class="collapse">
<h2 id="readings-13">Readings</h2>
<ul>
<li>Chapters <a href="https://geocompr.robinlovelace.net/">3-4 in GCR</a></li>
</ul>
<h2 id="tasks-13">Tasks</h2>
<ul>
<li>Complete project proposal and upload .Rmd and .md to Github</li>
</ul>
</div>
<hr />
</div>
<div id="tk_08-reproducible-research-literate-programming" class="section level2">
<h2><a href="./TK_08.html">TK_08 : Reproducible Research & Literate Programming</a></h2>
<p>Data I/O. RMarkdown to create dynamic research outputs. Publishing to github/word/html/etc</p>
<a class="btn btn-link" href="./TK_08.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i15">Preview Readings & Tasks </button>
<div id="i15" class="collapse">
<h2 id="readings-14">Readings</h2>
<ul>
<li>Chapters <a href="http://r4ds.had.co.nz">11, 26-30 inR4DS</a></li>
</ul>
<h2 id="tasks-14">Tasks</h2>
<ul>
<li>Create repository for final project</li>
<li>Explore various options for your project website</li>
<li>Push changes back to GitHub</li>
<li>Enable website on GitHub</li>
<li>Complete DataCamp Course in <a href="https://www.datacamp.com/courses/reporting-with-r-markdown">Reporting with R Markdown</a></li>
</ul>
</div>
<hr />
</div>
<div id="tk_09-apis-time-series-and-weather-data" class="section level2">
<h2><a href="./TK_09.html">TK_09 : APIs, time-series, and weather Data</a></h2>
<p>Processing daily weather data from NOAA</p>
<a class="btn btn-link" href="./TK_09.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i16">Preview Readings & Tasks </button>
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<h2 id="readings-15">## Readings</h2>
<h2 id="tasks-15">Tasks</h2>
<ul>
<li>Access and work with station weather data from Global Historical Climate Network (GHCN)</li>
<li>Explore options for plotting timeseries</li>
<li>Trend analysis</li>
<li>Compute Climate Extremes</li>
</ul>
</div>
<hr />
</div>
<div id="tk_11-project-peer-review" class="section level2">
<h2><a href="./TK_11.html">TK_11 : Project Peer Review</a></h2>
<p>Review project drafts from your peers</p>
<a class="btn btn-link" href="./TK_11.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i17">Preview Readings & Tasks </button>
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<h2 id="readings-16">Readings</h2>
<ul>
<li>GitHub <a href="https://help.github.com/articles/about-pull-requests/">Pull Requests</a></li>
</ul>
<h2 id="tasks-16">Tasks</h2>
<ul>
<li>Commit the current version of your project repository to GitHub</li>
<li>Review at least two other students’ projects and make comments via a <em>pull request</em> in GitHub before next class next week.</li>
</ul>
</div>
<hr />
</div>
<div id="cs_12-dynamic-html-graph-of-daily-temperatures" class="section level2">
<h2><a href="./CS_12.html">CS_12 : Dynamic HTML graph of Daily Temperatures</a></h2>
<p>Using DyGraph library.</p>
<a class="btn btn-link" href="./CS_12.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i18">Preview Readings & Tasks </button>
<div id="i18" class="collapse">
<h2 id="readings-17">Readings</h2>
<ul>
<li>Explore the <a href="http://rstudio.github.io/dygraphs/">DyGraphs webpage</a></li>
</ul>
<h2 id="tasks-17">Tasks</h2>
<ul>
<li>Download daily weather data for Buffalo, NY using an API</li>
<li>Generate a dynamic html visualization of the timeseries.</li>
<li>Save the graph using Export->Save as Webpage</li>
</ul>
</div>
<hr />
</div>
<div id="tk_12-dynamic-visualization" class="section level2">
<h2><a href="./TK_12.html">TK_12 : Dynamic Visualization</a></h2>
<p>Interactive web-based visualizations</p>
<a class="btn btn-link" href="./TK_12.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i19">Preview Readings & Tasks </button>
<div id="i19" class="collapse">
<h2 id="readings-18">Readings</h2>
<ul>
<li>Chapter <a href="http://r4ds.had.co.nz">28 in R4DS</a></li>
</ul>
<h2 id="tasks-18">Tasks</h2>
<ul>
<li>Browse the <a href="http://rstudio.github.io/leaflet/">Leaflet website</a> and take notes in your readme.md about potential uses in your project. What data could you use? How would you display it?</li>
<li>Browse the <a href="http://gallery.htmlwidgets.org/">HTML Widgets page</a> for many more examples. Take notes in your readme.md about potential uses in your project.</li>
</ul>
</div>
<hr />
</div>
<div id="tk_13-thanksgiving-week-tuesday-class-optional" class="section level2">
<h2><a href="./TK_13.html">TK_13 : Thanksgiving Week (Tuesday Class Optional)</a></h2>
<p>Optional Course Workshop</p>
<a class="btn btn-link" href="./TK_13.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i20">Preview Readings & Tasks </button>
<div id="i20" class="collapse">
<h2 id="readings-19">Readings</h2>
<ul>
<li>NULL</li>
</ul>
<h2 id="tasks-19">Tasks</h2>
<ul>
<li>Continue working on final project</li>
<li>Come to class with any questions</li>
</ul>
</div>
<hr />
</div>
<div id="tk_14-building-and-summarizing-models" class="section level2">
<h2><a href="./TK_14.html">TK_14 : Building and summarizing models</a></h2>
<p>Interactive web-based visualizations</p>
<a class="btn btn-link" href="./TK_14.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i21">Preview Readings & Tasks </button>
<div id="i21" class="collapse">
<h2 id="readings-20">Readings</h2>
<ul>
<li>Chapter <a href="http://r4ds.had.co.nz">23-25 in R4DS</a></li>
</ul>
<h2 id="tasks-20">Tasks</h2>
<ul>
<li>Demonstrate a simple presence/absence model in spatial context.</li>
<li>Model spatial dependence (autocorrelation) in the response.</li>
</ul>
</div>
<hr />
</div>
<div id="tk_15-final-presentation" class="section level2">
<h2><a href="./TK_15.html">TK_15 : Final Presentation</a></h2>
<p>Present your project to the class</p>
<a class="btn btn-link" href="./TK_15.html" role="button" >Full Description</a><button data-toggle="collapse" class="btn btn-link" data-target="#i22">Preview Readings & Tasks </button>
<div id="i22" class="collapse">
<h2 id="readings-21">Readings</h2>
<ul>
<li>Wikipedia pages about <a href="http://en.wikipedia.org/wiki/Lightning_Talk">Lightning talks</a></li>
<li>Wikipedia pages about <a href="http://en.wikipedia.org/wiki/Ignite_(event)">Ignite Sessions</a></li>
</ul>
<h2 id="tasks-21">Tasks</h2>
<ul>
<li>Prepare to give your 5 minute presentation</li>
<li>Present your analysis to your roommates, significant other, etc. and update your presentation based on the feedback</li>
<li>Get feedback from 2-3 fellow classmates on your presentation and update it based on their feedback</li>
<li>Give your 5 minute presentation in class</li>
</ul>
</div>
</div>
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