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Commits on Jul 11, 2025

• ActivePathways-vignette.Rmd URLs fixed

  reimand0

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• README.md URLs fixed

  reimand0

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• Update README.md

  reimand0

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Commits on Jun 29, 2025

• Merge pull request #27 from reimandlab/mykhaylo/aggregate_apw_cytoscape_output_files

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  MSlobody

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• feat: add tests for merge results function

  

  Michael

  authored and

  Michael

  committed
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• feat: update version to 2.0.6

  

  Michael

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  Michael

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• feat: update arguments for merge_results function

  

  Michael

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  Michael

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• docs: update manual for aggregating pathway outputs

  

  Michael

  authored and

  Michael

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Commits on Jun 10, 2025

• oxygenized and updated functions + readme vignettes to debug

  abahcheli

  committed
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• corrected 'tests' vector for automatically determining pathway contributions

  abahcheli

  committed
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Commits on Jun 9, 2025

• Tutorials and instructions added to readme and vignette

  abahcheli

  committed
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• Added functions within ActivePathways to merge results and merge (subset) GMT file

  abahcheli

  committed
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Commits on May 22, 2025

• feat: add tutorial for aggregating pathway output files

  

  Michael

  authored and

  Michael

  committed
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• feat: add tutorial for aggregating pathway output files

  

  Michael

  authored and

  Michael

  committed
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Commits on Jul 28, 2024

• add ref to new publication

  reimand0

  committed
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Commits on Jul 26, 2024

• docs: update version to 2.0.5

  MSlobody

  committed
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• feat: convert null data table entries to string

  MSlobody

  committed
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Commits on Jun 21, 2024

• Update README.md: zenodo link updated.

  reimand0

  authored
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• Update README.md

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  reimand0

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• docs: update package version to 2.0.4

  MSlobody

  committed
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• feat: add tests for scores and scores_direction rownames order

  MSlobody

  committed
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• feat: add check for scores and scores_direction rownames order

  MSlobody

  committed
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Commits on Jun 19, 2024

• docs: add zenodo doi to cite activepathways 2.0.3

  MSlobody

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Commits on Apr 15, 2024

• docs: adjust installation instructions spacing

  MSlobody

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• docs: add operating system and installation time information

  MSlobody

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Commits on Oct 31, 2023

• REadme and vignette updated with newer Pubmed URLs

  reimand0

  committed
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• readme listing v2.0.3 update too

  reimand0

  committed
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• updating version number to 2.0.3; documenting changes in readme

  reimand0

  committed
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Commits on Oct 30, 2023

• Merge pull request #22 from reimandlab/ActivePathways_2.0.2_minor_typos

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  MSlobody

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• docs: readme date change

  MSlobody

  committed
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Commits on Oct 29, 2023

• docs: updated vignette images, references and minor typos

  MSlobody

  committed
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• docs: added preprint to references

  MSlobody

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• docs: fix readme directional lineplot and legend

  MSlobody

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• docs: updated readme images

  MSlobody

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• feat: updated vignette images

  MSlobody

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