{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "id": "2225231d-36c1-4095-881f-31ad7149810f",
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/plain": [
       "'/data/lab/jianyu/git/TPCAV/examples'"
      ]
     },
     "execution_count": 1,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "%pwd"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "id": "2cd77575-6c00-4aa1-ad64-d6b3cd754bad",
   "metadata": {},
   "outputs": [
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/home/jmy5455/miniforge3/envs/test/lib/python3.14/site-packages/tqdm/auto.py:21: TqdmWarning: IProgress not found. Please update jupyter and ipywidgets. See https://ipywidgets.readthedocs.io/en/stable/user_install.html\n",
      "  from .autonotebook import tqdm as notebook_tqdm\n"
     ]
    }
   ],
   "source": [
    "import torch\n",
    "from tpcav import run_tpcav, helper\n",
    "\n",
    "device = 'cuda:0' if torch.cuda.is_available() else 'cpu'\n",
    "#==================== Prepare Model and Data transform function ================================\n",
    "class DummyModelSeq(torch.nn.Module):\n",
    "    def __init__(self):\n",
    "        super().__init__()\n",
    "        self.conv_layer_1 = torch.nn.Sequential(\n",
    "            torch.nn.Conv1d(4, 64, 25, padding=12, bias=True),\n",
    "            torch.nn.BatchNorm1d(64),\n",
    "            torch.nn.LeakyReLU()\n",
    "        )\n",
    "        self.conv_layer_2 = torch.nn.Sequential(\n",
    "            torch.nn.Conv1d(64, 128, 3, padding=1, stride=2, bias=True),\n",
    "            torch.nn.BatchNorm1d(128),\n",
    "            torch.nn.LeakyReLU(),\n",
    "        )\n",
    "\n",
    "        self.linear_layer_1 = torch.nn.Sequential(\n",
    "            torch.nn.Linear(512, 1),\n",
    "            torch.nn.LeakyReLU()\n",
    "        )\n",
    "        self.linear_layer_2 = torch.nn.Linear(128, 1)\n",
    "\n",
    "    def forward(self, seq):\n",
    "        y_hat = self.conv_layer_1(seq)\n",
    "        y_hat = self.conv_layer_2(y_hat)\n",
    "        y_hat = self.linear_layer_1(y_hat)\n",
    "        y_hat = y_hat.squeeze(-1)\n",
    "        y_hat = self.linear_layer_2(y_hat)\n",
    "        return y_hat"
   ]
  },
  {
   "cell_type": "markdown",
   "id": "41b300ac-242e-49fe-abab-02b75feaef88",
   "metadata": {
    "jp-MarkdownHeadingCollapsed": true
   },
   "source": [
    "## model training"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 32,
   "id": "6e704a4c-34e4-4987-b2fe-bcde68b98e11",
   "metadata": {
    "scrolled": true
   },
   "outputs": [
    {
     "data": {
      "text/html": [
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       "\n",
       "    .dataframe tbody tr th {\n",
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       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>chrom</th>\n",
       "      <th>start</th>\n",
       "      <th>end</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>chr17</td>\n",
       "      <td>75754688</td>\n",
       "      <td>75755712</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>chr3</td>\n",
       "      <td>127747022</td>\n",
       "      <td>127748046</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>chr22</td>\n",
       "      <td>46130993</td>\n",
       "      <td>46132017</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>chr3</td>\n",
       "      <td>139677291</td>\n",
       "      <td>139678315</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>chr8</td>\n",
       "      <td>123394394</td>\n",
       "      <td>123395418</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>...</th>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>56198</th>\n",
       "      <td>chr20</td>\n",
       "      <td>58209484</td>\n",
       "      <td>58210508</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>56199</th>\n",
       "      <td>chr17</td>\n",
       "      <td>45134930</td>\n",
       "      <td>45135954</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>56200</th>\n",
       "      <td>chr9</td>\n",
       "      <td>128117284</td>\n",
       "      <td>128118308</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>56201</th>\n",
       "      <td>chr1</td>\n",
       "      <td>150979121</td>\n",
       "      <td>150980145</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>56202</th>\n",
       "      <td>chr12</td>\n",
       "      <td>53675711</td>\n",
       "      <td>53676735</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "<p>56184 rows × 3 columns</p>\n",
       "</div>"
      ],
      "text/plain": [
       "       chrom      start        end\n",
       "0      chr17   75754688   75755712\n",
       "1       chr3  127747022  127748046\n",
       "2      chr22   46130993   46132017\n",
       "3       chr3  139677291  139678315\n",
       "4       chr8  123394394  123395418\n",
       "...      ...        ...        ...\n",
       "56198  chr20   58209484   58210508\n",
       "56199  chr17   45134930   45135954\n",
       "56200   chr9  128117284  128118308\n",
       "56201   chr1  150979121  150980145\n",
       "56202  chr12   53675711   53676735\n",
       "\n",
       "[56184 rows x 3 columns]"
      ]
     },
     "execution_count": 32,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "ctcf_peaks = helper.load_bed_and_center(\"data/MCF-7_CTCF_ENCFF942TCG.bed\", window=1024)\n",
    "ctcf_peaks = ctcf_peaks.loc[ctcf_peaks.chrom != 'chrM']\n",
    "ctcf_peaks"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 33,
   "id": "6d9604b7-4597-4f4f-85c4-98cb47afb881",
   "metadata": {
    "scrolled": true
   },
   "outputs": [
    {
     "data": {
      "text/html": [
       "<div>\n",
       "<style scoped>\n",
       "    .dataframe tbody tr th:only-of-type {\n",
       "        vertical-align: middle;\n",
       "    }\n",
       "\n",
       "    .dataframe tbody tr th {\n",
       "        vertical-align: top;\n",
       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>chrom</th>\n",
       "      <th>start</th>\n",
       "      <th>end</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>chr8</td>\n",
       "      <td>39267215</td>\n",
       "      <td>39268239</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>chr17</td>\n",
       "      <td>43229869</td>\n",
       "      <td>43230893</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>chr2</td>\n",
       "      <td>73528924</td>\n",
       "      <td>73529948</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>chr8</td>\n",
       "      <td>86008837</td>\n",
       "      <td>86009861</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>chr10</td>\n",
       "      <td>50239667</td>\n",
       "      <td>50240691</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>...</th>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "      <td>...</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>56179</th>\n",
       "      <td>chr4</td>\n",
       "      <td>76365762</td>\n",
       "      <td>76366786</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>56180</th>\n",
       "      <td>chr3</td>\n",
       "      <td>27330197</td>\n",
       "      <td>27331221</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>56181</th>\n",
       "      <td>chr14</td>\n",
       "      <td>1634799</td>\n",
       "      <td>1635823</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>56182</th>\n",
       "      <td>chr3</td>\n",
       "      <td>49255000</td>\n",
       "      <td>49256024</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>56183</th>\n",
       "      <td>chr1</td>\n",
       "      <td>220796727</td>\n",
       "      <td>220797751</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "<p>56184 rows × 3 columns</p>\n",
       "</div>"
      ],
      "text/plain": [
       "       chrom      start        end\n",
       "0       chr8   39267215   39268239\n",
       "1      chr17   43229869   43230893\n",
       "2       chr2   73528924   73529948\n",
       "3       chr8   86008837   86009861\n",
       "4      chr10   50239667   50240691\n",
       "...      ...        ...        ...\n",
       "56179   chr4   76365762   76366786\n",
       "56180   chr3   27330197   27331221\n",
       "56181  chr14    1634799    1635823\n",
       "56182   chr3   49255000   49256024\n",
       "56183   chr1  220796727  220797751\n",
       "\n",
       "[56184 rows x 3 columns]"
      ]
     },
     "execution_count": 33,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "random_regs = helper.random_regions_dataframe(\"data/hg38.analysisSet.fa.fai\", window=1024, n=len(ctcf_peaks))\n",
    "random_regs = random_regs.loc[random_regs.chrom != 'chrM']\n",
    "random_regs"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 34,
   "id": "167ad27b-bbdb-4c9f-93ef-6e954a968f82",
   "metadata": {
    "scrolled": true
   },
   "outputs": [],
   "source": [
    "from sklearn.model_selection import train_test_split\n",
    "\n",
    "train_df_pos, test_df_pos = train_test_split(ctcf_peaks, test_size=0.05)\n",
    "train_df_neg, test_df_neg = train_test_split(random_regs, test_size=0.05)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 35,
   "id": "fe1e77a9-e133-428e-93a9-fc9f85002753",
   "metadata": {},
   "outputs": [],
   "source": [
    "def df_to_one_hot_iter(df, infinite=False):\n",
    "    it = iter(helper.dataframe_to_fasta_iter(df, \"data/hg38.analysisSet.fa\", batch_size=8))\n",
    "    while True:\n",
    "        try:\n",
    "            yield helper.fasta_to_one_hot_sequences(next(it))\n",
    "        except StopIteration:\n",
    "            if infinite:\n",
    "                it = iter(helper.dataframe_to_fasta_iter(df, \"data/hg38.analysisSet.fa\", batch_size=8))\n",
    "                yield helper.fasta_to_one_hot_sequences(next(it))\n",
    "            else:\n",
    "                return\n",
    "        "
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 36,
   "id": "eede5edc-b6e0-433f-9c99-b2aa81af7778",
   "metadata": {
    "scrolled": true
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Evaluation loss after batch 0: 0.6937556266784668\n",
      "Evaluation loss after batch 100: 0.6942372918128967\n",
      "Evaluation loss after batch 200: 0.6925637722015381\n",
      "Evaluation loss after batch 300: 0.6919495463371277\n",
      "Evaluation loss after batch 400: 0.6913040280342102\n",
      "Evaluation loss after batch 500: 0.6903418898582458\n",
      "Evaluation loss after batch 600: 0.6883369088172913\n",
      "Evaluation loss after batch 700: 0.6819443702697754\n",
      "Evaluation loss after batch 800: 0.6625214219093323\n",
      "Evaluation loss after batch 900: 0.6370221376419067\n",
      "Evaluation loss after batch 1000: 0.6176310777664185\n",
      "Evaluation loss after batch 1100: 0.6073943376541138\n",
      "Evaluation loss after batch 1200: 0.5926850438117981\n",
      "Evaluation loss after batch 1300: 0.5794664621353149\n",
      "Evaluation loss after batch 1400: 0.5670604705810547\n",
      "Evaluation loss after batch 1500: 0.5582072138786316\n",
      "Evaluation loss after batch 1600: 0.5516800880432129\n",
      "Evaluation loss after batch 1700: 0.5421598553657532\n",
      "Evaluation loss after batch 1800: 0.5393367409706116\n",
      "Evaluation loss after batch 1900: 0.5279940962791443\n",
      "Evaluation loss after batch 2000: 0.5209202766418457\n",
      "Evaluation loss after batch 2100: 0.5119447112083435\n",
      "Evaluation loss after batch 2200: 0.5058941841125488\n",
      "Evaluation loss after batch 2300: 0.49614405632019043\n",
      "Evaluation loss after batch 2400: 0.48771438002586365\n",
      "Evaluation loss after batch 2500: 0.4763661324977875\n",
      "Evaluation loss after batch 2600: 0.46442487835884094\n",
      "Evaluation loss after batch 2700: 0.4521169066429138\n",
      "Evaluation loss after batch 2800: 0.43591076135635376\n",
      "Evaluation loss after batch 2900: 0.4250583350658417\n",
      "Evaluation loss after batch 3000: 0.41229158639907837\n",
      "Evaluation loss after batch 3100: 0.4034208059310913\n",
      "Evaluation loss after batch 3200: 0.3960020840167999\n",
      "Evaluation loss after batch 3300: 0.3864622116088867\n",
      "Evaluation loss after batch 3400: 0.38422316312789917\n",
      "Evaluation loss after batch 3500: 0.37985554337501526\n",
      "Evaluation loss after batch 3600: 0.37480998039245605\n",
      "Evaluation loss after batch 3700: 0.3682119846343994\n",
      "Evaluation loss after batch 3800: 0.36069247126579285\n",
      "Evaluation loss after batch 3900: 0.3596401810646057\n",
      "Evaluation loss after batch 4000: 0.3561800718307495\n",
      "Evaluation loss after batch 4100: 0.3543008267879486\n",
      "Evaluation loss after batch 4200: 0.35068196058273315\n",
      "Evaluation loss after batch 4300: 0.35159268975257874\n",
      "Evaluation loss after batch 4400: 0.34504151344299316\n",
      "Evaluation loss after batch 4500: 0.3449777066707611\n",
      "Evaluation loss after batch 4600: 0.3428124487400055\n",
      "Evaluation loss after batch 4700: 0.33861663937568665\n",
      "Evaluation loss after batch 4800: 0.3395470082759857\n",
      "Evaluation loss after batch 4900: 0.337537944316864\n",
      "Evaluation loss after batch 5000: 0.33596113324165344\n",
      "Evaluation loss after batch 5100: 0.33065593242645264\n",
      "Evaluation loss after batch 5200: 0.33615007996559143\n",
      "Evaluation loss after batch 5300: 0.3293520510196686\n",
      "Evaluation loss after batch 5400: 0.3264411985874176\n",
      "Evaluation loss after batch 5500: 0.3246862292289734\n",
      "Evaluation loss after batch 5600: 0.32377514243125916\n",
      "Evaluation loss after batch 5700: 0.32407236099243164\n",
      "Evaluation loss after batch 5800: 0.32550048828125\n",
      "Evaluation loss after batch 5900: 0.32608461380004883\n",
      "Evaluation loss after batch 6000: 0.31514811515808105\n",
      "Evaluation loss after batch 6100: 0.3212358057498932\n",
      "Evaluation loss after batch 6200: 0.31468433141708374\n",
      "Evaluation loss after batch 6300: 0.3136895000934601\n",
      "Evaluation loss after batch 6400: 0.3111656904220581\n",
      "Evaluation loss after batch 6500: 0.3136947751045227\n",
      "Evaluation loss after batch 6600: 0.31020092964172363\n",
      "Evaluation loss after batch 6700: 0.30775704979896545\n",
      "Evaluation loss after batch 6800: 0.3137766718864441\n",
      "Evaluation loss after batch 6900: 0.3080938458442688\n",
      "Evaluation loss after batch 7000: 0.30662912130355835\n",
      "Evaluation loss after batch 7100: 0.30252090096473694\n",
      "Evaluation loss after batch 7200: 0.30684593319892883\n",
      "Evaluation loss after batch 7300: 0.30277639627456665\n",
      "Evaluation loss after batch 7400: 0.3032972812652588\n",
      "Evaluation loss after batch 7500: 0.30140456557273865\n",
      "Evaluation loss after batch 7600: 0.30448102951049805\n",
      "Evaluation loss after batch 7700: 0.3037923276424408\n",
      "Evaluation loss after batch 7800: 0.30271974205970764\n",
      "Evaluation loss after batch 7900: 0.3004668056964874\n",
      "Evaluation loss after batch 8000: 0.2994200587272644\n",
      "Evaluation loss after batch 8100: 0.2959950566291809\n",
      "Evaluation loss after batch 8200: 0.29507961869239807\n",
      "Evaluation loss after batch 8300: 0.2947378158569336\n",
      "Evaluation loss after batch 8400: 0.29273247718811035\n",
      "Evaluation loss after batch 8500: 0.2946201264858246\n",
      "Evaluation loss after batch 8600: 0.295011967420578\n",
      "Evaluation loss after batch 8700: 0.29328325390815735\n",
      "Evaluation loss after batch 8800: 0.2950860261917114\n",
      "Evaluation loss after batch 8900: 0.28916841745376587\n",
      "Evaluation loss after batch 9000: 0.2975997030735016\n",
      "Evaluation loss after batch 9100: 0.294389009475708\n",
      "Evaluation loss after batch 9200: 0.29023122787475586\n",
      "Evaluation loss after batch 9300: 0.28775253891944885\n",
      "Evaluation loss after batch 9400: 0.2850485146045685\n",
      "Evaluation loss after batch 9500: 0.2926185429096222\n",
      "Evaluation loss after batch 9600: 0.2908644676208496\n",
      "Evaluation loss after batch 9700: 0.2893913984298706\n",
      "Evaluation loss after batch 9800: 0.288402795791626\n",
      "Evaluation loss after batch 9900: 0.2841135561466217\n",
      "Evaluation loss after batch 10000: 0.2800595164299011\n",
      "Evaluation loss after batch 10100: 0.28185147047042847\n",
      "Evaluation loss after batch 10200: 0.28194180130958557\n",
      "Evaluation loss after batch 10300: 0.2872686982154846\n",
      "Evaluation loss after batch 10400: 0.28600311279296875\n",
      "Evaluation loss after batch 10500: 0.2899096608161926\n",
      "Evaluation loss after batch 10600: 0.281756192445755\n",
      "Evaluation loss after batch 10700: 0.27953630685806274\n",
      "Evaluation loss after batch 10800: 0.2810150980949402\n",
      "Evaluation loss after batch 10900: 0.2809644341468811\n",
      "Evaluation loss after batch 11000: 0.27607646584510803\n",
      "Evaluation loss after batch 11100: 0.2794179320335388\n",
      "Evaluation loss after batch 11200: 0.28031015396118164\n",
      "Evaluation loss after batch 11300: 0.2863805294036865\n",
      "Evaluation loss after batch 11400: 0.28191637992858887\n",
      "Evaluation loss after batch 11500: 0.27828916907310486\n",
      "Evaluation loss after batch 11600: 0.2728225290775299\n",
      "Evaluation loss after batch 11700: 0.27511900663375854\n",
      "Evaluation loss after batch 11800: 0.27224817872047424\n",
      "Evaluation loss after batch 11900: 0.27437493205070496\n",
      "Evaluation loss after batch 12000: 0.27383923530578613\n",
      "Evaluation loss after batch 12100: 0.27727770805358887\n",
      "Evaluation loss after batch 12200: 0.27413931488990784\n",
      "Evaluation loss after batch 12300: 0.2696428596973419\n",
      "Evaluation loss after batch 12400: 0.27333322167396545\n",
      "Evaluation loss after batch 12500: 0.2759076654911041\n",
      "Evaluation loss after batch 12600: 0.2721416652202606\n",
      "Evaluation loss after batch 12700: 0.2702060639858246\n",
      "Evaluation loss after batch 12800: 0.27123725414276123\n",
      "Evaluation loss after batch 12900: 0.26947394013404846\n",
      "Evaluation loss after batch 13000: 0.26807308197021484\n",
      "Evaluation loss after batch 13100: 0.26731419563293457\n",
      "Evaluation loss after batch 13200: 0.26474180817604065\n",
      "Evaluation loss after batch 13300: 0.2744033634662628\n",
      "Evaluation loss after batch 13400: 0.26792287826538086\n",
      "Evaluation loss after batch 13500: 0.27208659052848816\n",
      "Evaluation loss after batch 13600: 0.2652274966239929\n",
      "Evaluation loss after batch 13700: 0.26365673542022705\n",
      "Evaluation loss after batch 13800: 0.2618635892868042\n",
      "Evaluation loss after batch 13900: 0.26717641949653625\n",
      "Evaluation loss after batch 14000: 0.26400643587112427\n",
      "Evaluation loss after batch 14100: 0.26155367493629456\n",
      "Evaluation loss after batch 14200: 0.2657955288887024\n",
      "Evaluation loss after batch 14300: 0.26814544200897217\n",
      "Evaluation loss after batch 14400: 0.26133400201797485\n",
      "Evaluation loss after batch 14500: 0.2637538015842438\n",
      "Evaluation loss after batch 14600: 0.2600990831851959\n",
      "Evaluation loss after batch 14700: 0.2626963257789612\n",
      "Evaluation loss after batch 14800: 0.269621878862381\n",
      "Evaluation loss after batch 14900: 0.2658490240573883\n",
      "Evaluation loss after batch 15000: 0.25614482164382935\n",
      "Evaluation loss after batch 15100: 0.25463759899139404\n",
      "Evaluation loss after batch 15200: 0.257185161113739\n",
      "Evaluation loss after batch 15300: 0.25754693150520325\n",
      "Evaluation loss after batch 15400: 0.25792503356933594\n",
      "Evaluation loss after batch 15500: 0.2532142698764801\n",
      "Evaluation loss after batch 15600: 0.2608712315559387\n",
      "Evaluation loss after batch 15700: 0.2541520297527313\n",
      "Evaluation loss after batch 15800: 0.2567054033279419\n",
      "Evaluation loss after batch 15900: 0.25150883197784424\n",
      "Evaluation loss after batch 16000: 0.256671667098999\n",
      "Evaluation loss after batch 16100: 0.2559809386730194\n",
      "Evaluation loss after batch 16200: 0.2554147243499756\n",
      "Evaluation loss after batch 16300: 0.25299271941185\n",
      "Evaluation loss after batch 16400: 0.25477033853530884\n",
      "Evaluation loss after batch 16500: 0.2507142424583435\n",
      "Evaluation loss after batch 16600: 0.2550141215324402\n",
      "Evaluation loss after batch 16700: 0.24872644245624542\n",
      "Evaluation loss after batch 16800: 0.25556305050849915\n",
      "Evaluation loss after batch 16900: 0.2552239000797272\n",
      "Evaluation loss after batch 17000: 0.25605523586273193\n",
      "Evaluation loss after batch 17100: 0.25009942054748535\n",
      "Evaluation loss after batch 17200: 0.24783039093017578\n",
      "Evaluation loss after batch 17300: 0.2523411810398102\n",
      "Evaluation loss after batch 17400: 0.24978014826774597\n",
      "Evaluation loss after batch 17500: 0.24643300473690033\n",
      "Evaluation loss after batch 17600: 0.2493063360452652\n",
      "Evaluation loss after batch 17700: 0.24342229962348938\n",
      "Evaluation loss after batch 17800: 0.24402856826782227\n",
      "Evaluation loss after batch 17900: 0.24692270159721375\n",
      "Evaluation loss after batch 18000: 0.2487742304801941\n",
      "Evaluation loss after batch 18100: 0.24775318801403046\n",
      "Evaluation loss after batch 18200: 0.24500888586044312\n",
      "Evaluation loss after batch 18300: 0.24569523334503174\n",
      "Evaluation loss after batch 18400: 0.24211788177490234\n",
      "Evaluation loss after batch 18500: 0.24748393893241882\n",
      "Evaluation loss after batch 18600: 0.24285492300987244\n",
      "Evaluation loss after batch 18700: 0.241144597530365\n",
      "Evaluation loss after batch 18800: 0.24039356410503387\n",
      "Evaluation loss after batch 18900: 0.24457277357578278\n",
      "Evaluation loss after batch 19000: 0.24079284071922302\n",
      "Evaluation loss after batch 19100: 0.23801422119140625\n",
      "Evaluation loss after batch 19200: 0.24262282252311707\n",
      "Evaluation loss after batch 19300: 0.24535487592220306\n",
      "Evaluation loss after batch 19400: 0.23978261649608612\n",
      "Evaluation loss after batch 19500: 0.23935513198375702\n",
      "Evaluation loss after batch 19600: 0.24893540143966675\n",
      "Evaluation loss after batch 19700: 0.2352587878704071\n",
      "Evaluation loss after batch 19800: 0.23788417875766754\n",
      "Evaluation loss after batch 19900: 0.2366536408662796\n",
      "Evaluation loss after batch 20000: 0.23615340888500214\n"
     ]
    }
   ],
   "source": [
    "def compute_loss(model, seq_pos, seq_neg):\n",
    "    label_pos = torch.ones(seq_pos.shape[0])\n",
    "    label_neg = torch.zeros(seq_neg.shape[0])\n",
    "    label = torch.cat([label_pos, label_neg]).unsqueeze(-1).to(seq_pos.device)\n",
    "    \n",
    "    y_pred = model(torch.cat([seq_pos, seq_neg]))\n",
    "    loss = torch.nn.functional.binary_cross_entropy_with_logits(y_pred, label)\n",
    "\n",
    "    return loss\n",
    "\n",
    "def eval_model(model):\n",
    "    model.eval()\n",
    "    losses = []\n",
    "    for seq_pos, seq_neg in zip(df_to_one_hot_iter(test_df_pos), df_to_one_hot_iter(test_df_neg)):\n",
    "        loss = compute_loss(model, seq_pos.to(device), seq_neg.to(device))\n",
    "        losses.append(loss.unsqueeze(-1).detach())\n",
    "    losses = torch.cat(losses).mean()\n",
    "    model.train()\n",
    "    return losses\n",
    "\n",
    "model = DummyModelSeq()\n",
    "model.to(device)\n",
    "model.train()\n",
    "optimizer = torch.optim.AdamW(model.parameters(), lr=1e-4)\n",
    "\n",
    "training_losses = []\n",
    "best_eval_loss = 100\n",
    "early_stop_counter = 0\n",
    "max_epochs = 100000\n",
    "patience = 100\n",
    "for i, (seq_pos, seq_neg) in enumerate(zip(df_to_one_hot_iter(train_df_pos, infinite=True), df_to_one_hot_iter(train_df_neg, infinite=True))):\n",
    "\n",
    "    loss = compute_loss(model, seq_pos.to(device), seq_neg.to(device))\n",
    "    loss.backward()\n",
    "\n",
    "    optimizer.step()\n",
    "    optimizer.zero_grad()\n",
    "\n",
    "    if i % 100 == 0:\n",
    "        eval_loss = eval_model(model)\n",
    "        if eval_loss < best_eval_loss:\n",
    "            best_eval_loss = eval_loss.item()\n",
    "            torch.save(model, 'data/mcf7_ctcf_best.pt')\n",
    "        else:\n",
    "            early_stop_counter += 1\n",
    "            if early_stop_counter > patience:\n",
    "                break\n",
    "\n",
    "        if i > max_epochs: break\n",
    "        #print(f\"Training loss after batch {i}: {loss}\")\n",
    "        print(f\"Evaluation loss after batch {i}: {eval_loss}\")\n"
   ]
  },
  {
   "cell_type": "markdown",
   "id": "b53ad165-2703-4ca6-a79a-3a6c4cba7bfc",
   "metadata": {},
   "source": [
    "## test TPCAV"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "id": "3e50a2d7-c167-4759-b6ca-382dbf87eaf1",
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "/data/lab/jianyu/git/TPCAV\n"
     ]
    }
   ],
   "source": [
    "%cd .."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "id": "bd8354cd-d8e1-4d35-912b-647a3d2f7759",
   "metadata": {},
   "outputs": [],
   "source": [
    "# By default, every concept extracts fasta sequences and bigwig signals from the given region\n",
    "# Use your own custom transformation function to get your desired inputs\n",
    "# Here we transform them into one-hot coded DNA sequences\n",
    "def transform_fasta_to_one_hot_seq(seq, chrom):\n",
    "    # `seq` is a list of fasta sequences\n",
    "    # `chrom` is a numpy array of bigwig signals of shape [-1, # bigwigs, len]\n",
    "    return (helper.fasta_to_one_hot_sequences(seq),) # it has to return a tuple of inputs, even if there is only one input"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "id": "e081c395-170d-4ab6-92c1-2eb00d5c1f98",
   "metadata": {
    "scrolled": true
   },
   "outputs": [
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAACCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Satellite/telo_TAR1 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC5a has 139 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER5B has 126 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie15a has 42 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGG)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_L3 has 283 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_Plat_L3 has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1K has 212 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/MIR_MIR1_Amn has 209 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER33 has 97 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACGCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB3 has 208 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT_MER53 has 69 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1A has 63 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TC)n has 71 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB5 has 114 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_Alu has 109 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA6 has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P1 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1L has 54 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1J2 has 50 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie5 has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1F2-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1F2 has 64 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSx3 has 488 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16C has 51 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_ERVL-E-int has 48 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_MamRep1527 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA8 has 36 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAT)n has 69 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3G has 93 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA9 has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR12F has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER45A has 39 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER58A has 125 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA14 has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACAA)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GT)n has 175 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCT)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYj4 has 32 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCT)n has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Low_complexity_A-rich has 252 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2 has 356 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTC)n has 31 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_FLAM_A has 162 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER47A has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME4c has 60 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSc has 390 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AC)n has 204 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA4 has 58 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AT)n has 159 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL?_LTR89 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC has 47 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TA)n has 129 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAC)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA7 has 34 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA16 has 32 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA2 has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M2 has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PREC2 has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PB has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger5b has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSc5 has 41 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger5 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M5 has 298 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M4 has 101 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAA)n has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_HAL1M8 has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1?_LTR103b_Mam has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1H2 has 52 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGT)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYk2 has 66 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4D1 has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4CL34 has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/RTE-X_L5 has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1H has 99 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAC)n has 33 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGTG)n has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1I has 104 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTA)n has 30 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(T)n has 271 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_MamRep605 has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR33 has 56 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTB1 has 47 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSq has 159 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CT)n has 60 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1C has 104 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TG)n has 222 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_FAM has 40 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3E has 48 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR33B has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER65D has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1D has 181 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1C has 80 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATATA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAA)n has 35 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA5 has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACTGT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAA)n has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_FLAM_C has 347 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_E has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER1A has 41 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER21C has 66 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR41 has 37 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAA)n has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB8 has 137 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger12 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR37A has 16 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTT)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSg4 has 144 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER11B has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCATCC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME4b has 142 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluJr4 has 126 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U6 has 21 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER8 has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie29b has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTD has 62 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Low_complexity_GA-rich has 301 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSg7 has 83 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie4z has 76 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAC)n has 33 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAT)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTT)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2B3 has 25 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER31-int has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER92-int has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34A has 24 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC3 has 70 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTA1 has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4A1 has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAACC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4E has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYc has 56 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4A has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCT)n has 31 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie30a has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACA)n has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER31B has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA4 has 39 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_FRAM has 244 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER112 has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/MULE-MuDR_Ricksha_0 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger4b has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie20a has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MD3 has 76 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYf1 has 30 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC4a has 65 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER39B has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME1 has 258 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTA)n has 16 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTTAA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR9B has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER5A has 252 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4E1 has 23 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E3 has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR37B has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1O has 30 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTA has 139 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER103C has 65 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR39 has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3B has 55 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA5 has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3D has 31 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P4 has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA2 has 23 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR22C2 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA15-16 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3A has 158 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA8A has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA8 has 75 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA10 has 27 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEd has 132 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_ERVL-int has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA7 has 27 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATA)n has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M7 has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_HAL1b has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1H1 has 28 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1B has 177 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1B-int has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1H1-int has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR64 has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1D has 65 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AG)n has 30 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACACACTCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Gln-CAA_ has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Ser-TCA(m) has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_MER124 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA11 has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATA)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATC)n has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTT)n has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTATTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER3 has 118 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER5A1 has 119 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3 has 63 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEg has 76 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC4 has 189 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR104_Mam has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_BLACKJACK has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M3 has 42 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR7 has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER67C has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAATG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR67B has 31 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR79 has 48 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie1b has 38 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie1a has 56 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger3a has 42 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER113A has 23 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACATACAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER44B has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Chap1a_Mam has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1C2 has 210 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M8 has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER102c has 27 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2d2 has 325 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger7 has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATT)n has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41D has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_HAL1 has 127 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1A1 has 57 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR78 has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTTT)n has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_D has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M4b has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(A)n has 191 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON76 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1B has 179 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC1 has 73 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2d has 176 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA3 has 32 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie19a has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME4a has 192 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCT)n has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR2C has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATGTG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATAGTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB4 has 41 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Satellite_BSR/Beta has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSc8 has 243 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER101-int has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LOR1-int has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR57-int has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_HERVK9-int has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER9a2 has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER102a has 35 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGATG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER67A has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER2 has 48 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_HERV16-int has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAG)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_X24_LINE has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEc has 125 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCAG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGC)n has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCT)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCC)n has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCG)n has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCC)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCC)n has 24 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTC)n has 25 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCC)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGA)n has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCGGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGC)n has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGGG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCACCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER63B has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCGTG)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAC)n has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAT)n has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4A1_ has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCT)n has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1G1 has 27 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYa5 has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MD has 60 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR12C has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCC)n has 16 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(C)n has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGCC)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCATC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCGGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCC)n has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR13A has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGCA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCAGG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCG)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger19b has 23 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEf has 52 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M4a2 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER49 has 36 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME2 has 115 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER50 has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSx4 has 143 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PB1 has 46 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCAGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCGG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_MamRep1151 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTG)n has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41B has 29 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER30 has 43 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Arthur1B has 16 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCATCCCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGGA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCCC)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCC)n has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR46 has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTG)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATC)n has 28 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCATGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER9a1 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CA)n has 154 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCG)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAGCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR13 has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR13_ has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER54A has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER68 has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGTCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_L3b has 66 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4B has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4B-int has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYe5 has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(G)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGC)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGG)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCT)n has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGCA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTGGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCC)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16B1 has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAGG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSq4 has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYc3 has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGTGAATG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYh3 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER20 has 196 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tag1_hAT-1_Mam has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER63D has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTG)n has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER66C has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYk3 has 67 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER66-int has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept srpRNA_7SLRNA has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYh9 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER74B has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR5_Hs has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGGTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCCCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR2B has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_Harlequin-int has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCTGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR75 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCTGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGAG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYa8 has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10A has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV9N-int has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVIP10F-int has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_MER131 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HUERS-P1-int has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR7B has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGG)n has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGGC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M1 has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie22a has 16 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGGCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER65A has 29 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER65-int has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER52A has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACA)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTG)n has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAT)n has 53 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER52C has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER83 has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAAA)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GC)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER113 has 39 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR26B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR42 has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4D has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCC)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCATC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M4c has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M4a1 has 28 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger1a_Art has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER65B has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCTCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYi6 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P5 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAC)n has 38 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Ac_OldhAT1 has 28 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC5 has 91 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGT)n has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACCCA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_ORSL-2b has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGTGCGGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYm1 has 39 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger1 has 62 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATG)n has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAACA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger16a has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Arthur1A has 16 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEb has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAA)n has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTT)n has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger15a has 37 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X26_DNA has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie15b has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger2 has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER44A has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER119 has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X7A_LINE has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER1B has 29 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie1 has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept rRNA_LSU-rRNA_Hsa has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CG)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCTCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACGCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTT)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACATGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16E1 has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_ERV3-16A3_I-int has 16 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_ERV3-16A3_LTR has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2D has 36 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB2 has 54 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCTG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie2b has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER81 has 53 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGAGT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER89 has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCC)n has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER91B has 21 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAA)n has 39 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER31A has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1A0 has 113 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTB has 64 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR18B has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie8 has 42 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAT)n has 23 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACAGCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAAC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER46C has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR81B has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR40a has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR81 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTT)n has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGAGGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER58B has 78 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER74A has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER63A has 31 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCA)n has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR52 has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga1 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGTGG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie16 has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2C1 has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCA)n has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger3c has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER91A has 28 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGTGA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGATGAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2B1 has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER47B has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB7 has 225 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACGCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGC)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/tRNA-Deu_AmnSINE2 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAG)n has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCAG)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTC)n has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/RTE-BovB_MamRTE1 has 50 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACGGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTTTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1A has 32 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACT)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER45B has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCTGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGG)n has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTT)n has 31 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGAG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTT)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR81C has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1J has 101 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger2a has 21 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAG)n has 25 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER66B has 23 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR41C has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34C_ has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER58C has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCCCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCGCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR26 has 21 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGCAGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTGGA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCACG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCCG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGA)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGCCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGG)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACATA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGCTCCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAAGAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCC)n has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTGGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTG)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGGCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCT)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATT)n has 21 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTT)n has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept scRNA_BC200 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR40c has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCTGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCCGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR19A has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCGC)n has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGAGTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MCc has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/5S-Deu-L2_AmnSINE1 has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTA-int has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_HERVL-int has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR27C has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger2b_Pri has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER117 has 47 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCTGGGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCAGGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_LTR106_Mam has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1H-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/PiggyBac_MER75 has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2B4 has 36 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger17c has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger17d has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGTGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie25 has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER51A has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER96 has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR40b has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCT)n has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTT)n has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E2 has 23 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACATGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_ERVL-B4-int has 23 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER107 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Arthur1C has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER45C has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1C-int has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCC)n has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCC)n has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT?_MER121 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA12 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYg6 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16A1 has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTB-int has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTGTC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MDa has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATG)n has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTTC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTTC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3Cz has 122 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME2z has 53 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA15 has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAT)n has 30 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTC)n has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACATG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGT)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTA)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Gly-GGA has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAAACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCATG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON16 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTA)n has 37 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGCCA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_Eulor10 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAT)n has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGT)n has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTACACATG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGTGTGCAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCA)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCTC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA10 has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_X30_DNA has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC2 has 39 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAT)n has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGA)n has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamTip2b has 47 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCGGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGGGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGAAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTC)n has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON80_AMi has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACATG)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTG)n has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3C has 25 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEh has 25 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA5A has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGTTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCAAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACAGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACCTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10B2 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR21C has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTC)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR62 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAGC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGACA)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACCTCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1D-int has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCGG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER44C has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie4a has 33 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34C2 has 16 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER39 has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYh3a3 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Mariner_MADE2 has 21 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGGTG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGTGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Satellite_MSR1 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGCGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept RC/Helitron_Helitron3Na_Mam has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR5B has 16 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR45C has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGTG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGATGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger3d has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR8A has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR38 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR38-int has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_HERVK13-int has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR3B_ has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E1 has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACA)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR78B has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB1 has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger4a has 23 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCGCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTGT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MD2 has 50 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER115 has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEi has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER77 has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR3A has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAT)n has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER77B has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR33C has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR85c has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga1a has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga1d has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR105_Mam has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2B2 has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR40A1 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_HERVL40-int has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/PiggyBac_MER85 has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1J1 has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCTG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER92B has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10E has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER63C has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16E2 has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCTAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E1A has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA13 has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga1b has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCTT)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1F1 has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/RTE-X_L4_B_Mam has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamRep4096 has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME5 has 31 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCACACACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCACTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER21B has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P2 has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR85a has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger19a has 36 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_HAL1ME has 24 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR24C has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA1 has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGG)n has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTC has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYb8 has 16 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER21A has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTACA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X6a_DNA has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTB2 has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCTG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTGCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCA)n has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATT)n has 34 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTTC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTC)n has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2A2 has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGACCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER48 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVH-int has 25 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA17 has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PB4 has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR53B has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAT)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER61B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3F has 45 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Leu-TTA has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1A0-int has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TT)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LOR1a has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAT)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR33A_ has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTC)n has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57B1 has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYh7 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGACT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16A2 has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR53 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X17_LINE has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGCA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER90 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTATAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR50 has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GA)n has 27 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1A2 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGTT)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL?_LTR89B has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER11A has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR81AB has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1B1 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER61D has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER61A has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Arthur1 has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X7B_LINE has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR8 has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100?_Eutr15 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA6 has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MamRep434 has 25 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACACACATGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PB2 has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P3 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_EUTREP8 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_CR1_Mam has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER45R has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTT)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCT)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger17a has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamTip1 has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGTT)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR101_Mam has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGT)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTCTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATCAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGCAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1G has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger11a has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER110 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1N2 has 29 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR66 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_HERVL66-int has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAA)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER54B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATATA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER70A has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCACAG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACAGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MD1 has 49 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypsy2-I has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATCCATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_LTR90B has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGTGAGGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGATGA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER20B has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAACC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCATGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATCAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAA)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/tRNA-RTE_MamSINE1 has 33 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16D has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1F has 31 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR24 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR24B has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57A1 has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATACGTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACATAC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10C has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1J-int has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Mariner_MADE1 has 33 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2A1 has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR48B has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34-int has 17 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR49-int has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Glu-GAA has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER70B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT?_MER121B has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/tRNA_LFSINE_Vert has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger9b has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_UCON49 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga2_a has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGATTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGG)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATA)n has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR1a has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTCCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGA)n has 16 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAT)n has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATG)n has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger23a has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTT)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEj has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/RTE-X_L4_A_Mam has 38 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT_MamRep38 has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PB3 has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR23 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_ERV24_Prim-int has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR23-int has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34B has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR54 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTC)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34C has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/PiggyBac_MER75A has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16A has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M6 has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER44D has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34A1 has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAATCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/RTE-X_L4_C_Mam has 25 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACACAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100?_MamRep1879 has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER94 has 24 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X12_DNA has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAAA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16B2 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCTCCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGCTG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTAT)n has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATC)n has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Zaphod3 has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTT)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAGAC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTATT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER58D has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamTip2 has 35 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR33A has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41A has 24 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR8B has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER5C has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON63 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGA)n has 32 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGAGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1C2-int has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger13a has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16D2 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_ORSL has 20 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Mariner_MARNA has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAG)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1G1-int has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR84b has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1C has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1A-int has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTT)n has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAC)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATACA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_LTR91 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGTGG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGTGTGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGGTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR41B has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_LTR91A has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGA)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGA)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSq10 has 21 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/Jockey_X12_LINE has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCAGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER105 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR19B has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGACCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVIP10FH-int has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie16a has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_FordPrefect_a has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER11C has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCACCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGACCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR85b has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR71B has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16D1 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA3 has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_X9_LINE has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATGGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGGGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCAGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie18a has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER51E has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATACA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER91C has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCACAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCTTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR86A1 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U2 has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR83 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR75_1 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER72 has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGGGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2-3_Crp has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON88 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTC)n has 19 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAAGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAAAA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie32a has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAAGAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAT)n has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1D-int has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCCAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER52D has 21 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_X15_LINE has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR12E has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATA)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACACAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCCCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGTGTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_MamRep564 has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCCC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAAAAAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAATA)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR21B has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVFH21-int has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR14B has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYk4 has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTATT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Cheshire has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_MamRep605b has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGTTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR12 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCTC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER101 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X7C_LINE has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTTT)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR36 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATACAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_MER126 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_MER130 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON22 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1M has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR71A has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U13_ has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/Penelope_Penelope1_Vert has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACATA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTTTG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTATTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger14a has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie7a has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MamRep137 has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAG)n has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie29a has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie17a has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER94B has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAC)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATT)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_Eulor2A has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON20 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTCC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGGT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_CR1-3_Croc has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTT)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTCT)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR86A2 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATGAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER102b has 23 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X5B_LINE has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTATTAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X20_LINE has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U1 has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTG)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATAGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATATACAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACATTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCAGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/Dong-R4_Mam_R4 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTATC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAGCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2C2 has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/MULE-MuDR_Ricksha_c has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1G3 has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_X9a_DNA has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAGA)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_CR1-16_AMi has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER96B has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACTCA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCTGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACC)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTACTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1F has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON57 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCAGTGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie24 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGAG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGCCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGG)n has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTTT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/PiggyBac_MER75B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAACA)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACACG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAGTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept rRNA_5S has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGGTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAA)n has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER90a has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA4A has 21 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGT)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATACC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATAT)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATA)n has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger3b has 22 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAAA)n has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Glu-GAG_ has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAACAA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Zaphod has 14 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER84 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER84-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept scRNA_HY1 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATCAC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCGCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MARE4 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAATAG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie10 has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR9D has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_F has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCTGAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie26a has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie21a has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR2c has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Ac_EuthAT-2 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGTAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGGG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR29 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_B has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATTTTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR1b has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAGAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTAA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGG)n has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie10a has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger16b has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGAGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGTCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR86C has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U5 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCACTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2-2_Mam has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie2a has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGAAAA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTAA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_MER104 has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGAA)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_A has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAATA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga11a has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER5C1 has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATGAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAAGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie23a has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger9a has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie17 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATACTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTATA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MCb has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAATGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_C has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAG)n has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc1_X32_DNA has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MCa has 27 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCT)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_MARE8 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER51B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV9-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR47A has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER9a3 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR82A has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR21A has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR77 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR61 has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAACT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER106B has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTAC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR56 has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTTT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4C has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41E has 10 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYe6 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVFH19-int has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER110A has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYd8 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER11D has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCAGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger10 has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_hAT-N1a_Mam has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR3a has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL?_Eutr10 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR26E has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAGAA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAAC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTATTT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamRep488 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCGCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2B5 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCACC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie7 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCTG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Low_complexity_polypurine has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Zaphod2 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAACAC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR9 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR60B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR2 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGCGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57C1 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTATT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER21-int has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYi6_4d has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAAT)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger4 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER47C has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTTT)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_ORSL-2a has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGCG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACA)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept RNA_7SK has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAAAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1D1 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR51 has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCTC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTTTATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga1c has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTAT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCTCTGTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCATT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAGCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Zaphod5a has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGTTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTTTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X7D_LINE has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAATT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER106A has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTCTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATAAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR84a has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAGAAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTGTT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGTAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_UCON14 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON70 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/Kolobok_UCON29 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie13a has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2F has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAATTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2-1_AMi has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATCTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCCCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCGTCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGCGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACAGA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCAGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCTC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT?_UCON105 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACATG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_UCON81 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATTTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT_UCON73 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAG)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGAGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamTip3 has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie4 has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR26C has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER2B has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAACC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTAAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc1_EutTc1-N2 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAAGGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar_X5a_DNA has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAC)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie13b has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTGG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCACTC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16 has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR43B has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCTCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCC)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGACAG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1?_LTR103_Mam has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCACG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTATA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR4 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR47B2 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTTTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCCA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X1_DNA has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAGCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCTGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc1_X33a_DNA has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger22N1 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTTT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCACC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCTAGAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATGTG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept scRNA_HY3 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_ERV24B_Prim-int has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Mariner_HSMAR1 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCGCCGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATTT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTATTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34B-int has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGATGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCTC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR75B has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACACCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTCTC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT_MamRep1894 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR27B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGGAGAGTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCAGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1C1 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER67B has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X6b_DNA has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_UCON34 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U3 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_Eutr11 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar_X4b_DNA has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER97c has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2E has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR65 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Mariner_HSMAR2 has 9 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger8 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER52-int has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR22B1 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV4_I-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Zaphod4a has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER68-int has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER70C has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR102_Mam has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10F has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAGA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER6 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U13 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger6a has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGAAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PRIMA4-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_HERVK-int has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACAGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41G has 13 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAATA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1HS has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACTT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR44 has 18 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR45B has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57A-int has 12 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCT)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR45 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M3f has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR57 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV3-int has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger6 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTAG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Satellite/centr_GSATII has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVE-int has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTGAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCTAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAGAACAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAGAAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATAA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1C3 has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR7Y has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATATTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACATAT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGAGG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATATA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTGT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV9NC-int has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR12D has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCTTATA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LOR1b has 7 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR88a has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTCTT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER6B has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR14A has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACATTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGTTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCATA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_UCON58 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamTip1b has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTGGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER6C has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR22A has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger18a has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAATA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MST-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYb9 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/MULE-MuDR_Ricksha has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/MULE-MuDR_Ricksha_a has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR80A has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTCTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie31a has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON35 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR86B1 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON41 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAACAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR1c has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR82B has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR88b has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATGTACATA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAAC)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept RC?/Helitron?_Helitron2Na_Mam has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAATTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1F-int has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL?_LTR55 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_X34_DNA has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGATAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAA)n has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER6A has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1I-int has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAGAG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR9A1 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger12c has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger12A has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_HERVL74-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCCC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON71_Crp has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_MER135 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Thr-ACA has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR32 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCTCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_CR1-1_Amn has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X1_LINE has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAAAA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCTCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER127 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON65 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATCATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAATAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCACCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X6B_LINE has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10D has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGGTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PRIMA4_LTR has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCTCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57E2 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR1d has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_CR1-L3A_Croc has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACAA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_UCON78 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_EUTREP2 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAATTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57F has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar_DNA1_Mam has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie17b has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U7 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1J1-int has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGATGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGG)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_MER129 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X6A_LINE has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGTCGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATT)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCAAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGTGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGCCCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MERX has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger17 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTAA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCCA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_EUTREP16 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTATAAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTTCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCAG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR4 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER87 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR49 has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER51D has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Asn-AAC has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PRIMA41-int has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-His-CAY_ has 6 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Gly-GGG has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Val-GTG has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Gln-CAG has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTTTT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAACAAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCTG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCAGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTATA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAATAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR39-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X9b_DNA has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGAG)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57B2 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGTGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAGTAACCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTCCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR54B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR76 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR2b has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER50C has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Met_ has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PABL_B has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTCTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR15 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGGAAAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCATTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR38B has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV-Fc2_LTR has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCGCGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER61-int has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGGCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAAG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGCTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR81A has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar_UCON44 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON47 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT?_UCON89 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCAGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Chap1_Mam has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept RC/Helitron_Helitron1Na_Mam has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept RC/Helitron_Helitron1Nb_Mam has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGACC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTA)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTGTTAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGATGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGA)n has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGAGGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGACCTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCACT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_Eutr18 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCAGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X11_DNA has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_X23_DNA has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_UCON11 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGTCAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTACTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATGGA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41-int has 15 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTAGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAATAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCTCTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1F1 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGACGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCACC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGCAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCATG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X8_LINE has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGAAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCATCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACACC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAACCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCACC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACAGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTACT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2-1_Crp has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGTGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4D0 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTTT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTATTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER30B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGATA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAACT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTAAATGACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HUERS-P3-int has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_Eutr2B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAACAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV35I-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U4 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR37-int has 11 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie30b has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR28B has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCATC)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAAAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGACCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie14a has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAACAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEg2 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR14 has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_HERVK14C-int has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER66A has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGyp-int has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1A1-int has 8 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR46-int has 5 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M2a has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4-int has 26 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P4e has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATCAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie9 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR26D has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_UCON86 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_LTR107_Mam has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCTATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTAGGT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGACAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATT)n has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGATG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_UCON21 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger20a has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAATTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCACTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCCCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGTTAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_Eulor1 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR7C has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAGTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCAATT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATATAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER73 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTA)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTAAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PBa has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR06 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1E has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR48 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGATAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAGCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTATG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAACC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCAGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100?_hAT-N1_Mam has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAACCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAATC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATGTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGACAGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAAGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E3-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PABL_A has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR28C has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGAAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1K-int has 4 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTTTTT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57-int has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACAGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACAG)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCTGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Val-GTY has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTATTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTCTCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAATG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGGGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR47A2 has 3 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_UCON38 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTATA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Arthur2 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCCCGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCT)n has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGCT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger21a has 2 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGTCC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_Eutr5 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATTAAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGACTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAAT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER50-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTTTA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar_X4a_DNA has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCATT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCAAGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGCCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAAGGGA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTCTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATGTG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACACA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAGAAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGGAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PABL_B-int has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR88c has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCGGC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie10b has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON4 has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAGCAG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATTTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTC)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAGAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAACG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGGT)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tag1_hAT-5_Mam has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCGCG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAGG)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCAA)n has 1 samples, fewer than min_samples=500; skipping\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0001:GATA-PROP:GATA\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0002:PROP-ALX:Homeodomain\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0003:HNF1A-HNF1B:Homeodomain\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0004:ZSCAN:C2H2_ZF\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0005:POU3F-POU1F:Homeodomain,POU\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0078:CTCF-CTCFL:C2H2_ZF\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0111:CTCF-KLF:C2H2_ZF\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept random_regions\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/MIR_MIR3\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept LINE/L2_L2a\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/MIR_MIR\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept LINE/L2_L2b\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept LINE/L2_L2c\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluSp\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/MIR_MIRb\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/MIR_MIRc\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluJo\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluJr\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluSx\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluSz\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluY\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluJb\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluSq2\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluSg\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluSx1\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluSz6\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept Low_complexity_G-rich\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept random_regions\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0001:GATA-PROP:GATA\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0002:PROP-ALX:Homeodomain\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0003:HNF1A-HNF1B:Homeodomain\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0004:ZSCAN:C2H2_ZF\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0005:POU3F-POU1F:Homeodomain,POU\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0078:CTCF-CTCFL:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 13\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6381\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6600\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.5700\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0111:CTCF-KLF:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-08} | Iterations: 21\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6953\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6800\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.4400\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 16\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6517\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6400\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.5400\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 14\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7662\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7300\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7000\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-06} | Iterations: 12\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6866\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6800\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.5600\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-06} | Iterations: 18\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6754\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6600\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.5300\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 14\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6841\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6500\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.5300\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0001:GATA-PROP:GATA\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0002:PROP-ALX:Homeodomain\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0003:HNF1A-HNF1B:Homeodomain\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0004:ZSCAN:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6940\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6800\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6500\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0005:POU3F-POU1F:Homeodomain,POU\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 26\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7239\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6700\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6500\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0078:CTCF-CTCFL:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 17\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7289\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7200\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6200\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 21\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8881\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9200\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8800\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0111:CTCF-KLF:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 27\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7475\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7300\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6700\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 13\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7861\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7700\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6400\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-06} | Iterations: 18\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7910\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8300\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7900\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0001:GATA-PROP:GATA\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0002:PROP-ALX:Homeodomain\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0003:HNF1A-HNF1B:Homeodomain\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0004:ZSCAN:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 12\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7662\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8100\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7700\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0005:POU3F-POU1F:Homeodomain,POU\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-06} | Iterations: 21\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8172\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8000\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6400\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-06} | Iterations: 13\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7935\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8000\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6700\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0078:CTCF-CTCFL:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-06} | Iterations: 23\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8284\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8200\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7500\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9664\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9600\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9300\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0111:CTCF-KLF:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 19\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8520\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8700\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8200\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 15\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8731\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8600\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8100\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/MIR_MIR3\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept LINE/L2_L2a\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/MIR_MIR\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept LINE/L2_L2b\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept LINE/L2_L2c\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluSp\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/MIR_MIRb\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/MIR_MIRc\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluJo\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluJr\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluSx\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluSz\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 14\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8287\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8265\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7347\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 22\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7766\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8469\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6735\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-08} | Iterations: 29\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8261\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8469\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7143\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-06} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9569\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9490\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9490\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 12\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7982\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6837\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7347\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 22\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7525\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7449\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6429\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 23\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7741\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7449\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6429\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 21\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9086\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8878\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8469\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9036\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9082\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8776\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-06} | Iterations: 19\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7728\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7245\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6735\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 17\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9327\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9388\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9184\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 12\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9391\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9388\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8367\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluY\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluJb\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluSq2\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9772\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9796\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9388\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluSg\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 13\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9023\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9184\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8980\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 12\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9518\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9184\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9184\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluSx1\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluSz6\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept Low_complexity_G-rich\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9695\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9490\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9184\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9505\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9796\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9490\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9797\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9796\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9490\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 13\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9264\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9592\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8061\n",
      "INFO:tpcav.cavs:Skipping CAV AC0001:GATA-PROP:GATA with F-score 0.763 below threshold 0.900\n",
      "INFO:tpcav.cavs:Skipping CAV AC0003:HNF1A-HNF1B:Homeodomain with F-score 0.747 below threshold 0.900\n",
      "INFO:tpcav.cavs:Skipping CAV AC0111:CTCF-KLF:C2H2_ZF with F-score 0.824 below threshold 0.900\n",
      "INFO:tpcav.cavs:Skipping CAV AC0002:PROP-ALX:Homeodomain with F-score 0.617 below threshold 0.900\n",
      "INFO:tpcav.cavs:Skipping CAV AC0004:ZSCAN:C2H2_ZF with F-score 0.812 below threshold 0.900\n",
      "INFO:tpcav.cavs:Skipping CAV AC0005:POU3F-POU1F:Homeodomain,POU with F-score 0.680 below threshold 0.900\n"
     ]
    },
    {
     "data": {
      "image/png": "[encoded data, 19728 characters]",
      "text/plain": [
       "<Figure size 1000x1000 with 4 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "motif_path = \"data/motif-clustering-v2.1beta_consensus_pwms.test.meme\" # motif file in meme format for constructing motif concepts\n",
    "bed_seq_concept = \"data/hg38_rmsk.sample.bed\" # a bed file to supply concepts described by a set of regions, format [chrom, start, end, label, concept_name]\n",
    "genome_fasta = \"data/hg38.analysisSet.fa\"\n",
    "model = torch.load(\"data/mcf7_ctcf_best.pt\", map_location=device, weights_only=False) # load the model\n",
    "layer_name = \"linear_layer_1\"   # name of the layer to be interpreted, you should be able to retrieve the layer object by getattr(model, layer_name)\n",
    "\n",
    "# concept_fscores_dataframe: fscores of each concept\n",
    "# motif_cav_trainers: each trainer contains the cav weights of motifs inserted different number of times\n",
    "# bed_cav_trainer: trainer contains the cav weights of the sequence concepts provided in bed file\n",
    "concept_fscores_dataframe, motif_cav_trainers, bed_cav_trainer = run_tpcav(\n",
    "    model=model,\n",
    "    layer_name=layer_name,\n",
    "    motif_file=motif_path,\n",
    "    motif_file_fmt='meme',  # specify your motif file format, either meme or consensus (tab delimited file in form [motif_name, consensus_sequence])\n",
    "    genome_fasta=genome_fasta,\n",
    "    num_motif_insertions=[12, 24, 36],\n",
    "    bed_seq_file=bed_seq_concept,\n",
    "    num_samples_for_cav=500,\n",
    "    output_dir=\"test_run_tpcav_output/\",\n",
    "    input_transform_func=transform_fasta_to_one_hot_seq,\n",
    "    p=4) # number of concurrent SGDClassifier can be run at the same time, increase it if you have available CPU power, it speeds up training significantly"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "id": "fe76a7b3-e897-4cab-9504-0b7191ac52f3",
   "metadata": {},
   "outputs": [
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/home/jmy5455/miniforge3/envs/test/lib/python3.14/site-packages/captum/attr/_core/deep_lift.py:294: UserWarning: Input Tensor 1 did not already require gradients, required_grads has been set automatically.\n",
      "  gradient_mask = apply_gradient_requirements(inputs_tuple)\n",
      "/home/jmy5455/miniforge3/envs/test/lib/python3.14/site-packages/captum/log/dummy_log.py:39: UserWarning: Setting forward, backward hooks and attributes on non-linear\n",
      "               activations. The hooks and attributes will be removed\n",
      "            after the attribution is finished\n",
      "  return func(*args, **kwargs)\n",
      "INFO:tpcav.cavs:Skipping CAV AC0001:GATA-PROP:GATA with F-score 0.763 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0003:HNF1A-HNF1B:Homeodomain with F-score 0.747 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0002:PROP-ALX:Homeodomain with F-score 0.617 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0005:POU3F-POU1F:Homeodomain,POU with F-score 0.680 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIR3 with F-score 0.714 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2a with F-score 0.653 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIR with F-score 0.692 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2b with F-score 0.735 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2c with F-score 0.711 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIRb with F-score 0.588 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIRc with F-score 0.673 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0001:GATA-PROP:GATA with F-score 0.763 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0003:HNF1A-HNF1B:Homeodomain with F-score 0.747 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0002:PROP-ALX:Homeodomain with F-score 0.617 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0005:POU3F-POU1F:Homeodomain,POU with F-score 0.680 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIR3 with F-score 0.714 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2a with F-score 0.653 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIR with F-score 0.692 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2b with F-score 0.735 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2c with F-score 0.711 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIRb with F-score 0.588 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIRc with F-score 0.673 below threshold 0.800\n",
      "INFO:tpcav.cavs:PWM not found for Low_complexity_G-rich\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluSz\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluSx\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluSq2\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluSg\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluSz6\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluSx1\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluJb\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluY\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluJr\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluSp\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluJo\n"
     ]
    },
    {
     "data": {
      "image/png": "[encoded data, 101532 characters]",
      "text/plain": [
       "<Figure size 1000x1000 with 8 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "image/png": "[encoded data, 57996 characters]",
      "text/plain": [
       "<Figure size 1000x1000 with 5 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "image/png": "[encoded data, 100548 characters]",
      "text/plain": [
       "<Figure size 1000x1000 with 20 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "from tpcav import report\n",
    "\n",
    "#==================== Compuate layer attributions of target testing regions ================================\n",
    "# retrieve the tpcav model\n",
    "tpcav_model = bed_cav_trainer.tpcav\n",
    "\n",
    "# create input regions and baseline regions for attribution\n",
    "ctcf_peaks = helper.load_bed_and_center(\"data/MCF-7_CTCF_ENCFF942TCG.bed\", window=1024).sample(n=100)\n",
    "random_regions = helper.random_regions_dataframe(genome_fasta + \".fai\", 1024, 100, seed=2)\n",
    "# create iterators to yield one-hot encoded sequences from the region dataframes\n",
    "def pack_data_iters(df):\n",
    "    seq_fasta_iter = helper.dataframe_to_fasta_iter(df, genome_fasta, batch_size=8)\n",
    "    seq_one_hot_iter = (helper.fasta_to_one_hot_sequences(seq_fasta) for seq_fasta in seq_fasta_iter)\n",
    "    return zip(seq_one_hot_iter, )\n",
    "# compute layer attributions given the iterators of testing regions and control regions\n",
    "attributions = tpcav_model.layer_attributions(pack_data_iters(ctcf_peaks), pack_data_iters(random_regions))\n",
    "# generate a new html report with TPCAV score computed\n",
    "report.generate_tpcav_html_report(\"report_tpcav_score.html\", motif_cav_trainers,\n",
    "                               non_motif_cav_trainers = {'repeats': bed_cav_trainer},\n",
    "                               attributions = [attributions, ],  # if you have multiple sets of attributions you can provide a list\n",
    "                               motif_file=motif_path, motif_file_fmt='meme', fscore_thresh=0.8)\n",
    "\n",
    "# save the trainers for future use\n",
    "torch.save(motif_cav_trainers, \"motif_cav_trainers.pt\")\n",
    "torch.save(bed_cav_trainer, \"bed_cav_trainer.pt\")"
   ]
  },
  {
   "cell_type": "markdown",
   "id": "d74495fd-5534-435a-bf7e-e94c0b361e8d",
   "metadata": {},
   "source": [
    "## test"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "id": "4a5faa7d-2307-405f-8e4e-023ba134265a",
   "metadata": {
    "scrolled": true
   },
   "outputs": [
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAACCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Satellite/telo_TAR1 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC5a has 139 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER5B has 126 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie15a has 42 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGG)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_L3 has 283 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_Plat_L3 has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1K has 212 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/MIR_MIR1_Amn has 209 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSp has 884 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER33 has 97 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACGCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB3 has 208 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT_MER53 has 69 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1A has 63 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TC)n has 71 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluJo has 676 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB5 has 114 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_Alu has 109 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA6 has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P1 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1L has 54 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1J2 has 50 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie5 has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1F2-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1F2 has 64 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSx3 has 488 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16C has 51 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_ERVL-E-int has 48 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_MamRep1527 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA8 has 36 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAT)n has 69 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3G has 93 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA9 has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR12F has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER45A has 39 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER58A has 125 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA14 has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACAA)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GT)n has 175 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCT)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYj4 has 32 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCT)n has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Low_complexity_A-rich has 252 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2 has 356 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTC)n has 31 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_FLAM_A has 162 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER47A has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME4c has 60 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSc has 390 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AC)n has 204 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA4 has 58 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AT)n has 159 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL?_LTR89 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC has 47 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TA)n has 129 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAC)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA7 has 34 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA16 has 32 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA2 has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M2 has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PREC2 has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PB has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger5b has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSc5 has 41 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger5 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M5 has 298 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M4 has 101 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAA)n has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_HAL1M8 has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1?_LTR103b_Mam has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1H2 has 52 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGT)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYk2 has 66 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4D1 has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4CL34 has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/RTE-X_L5 has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1H has 99 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAC)n has 33 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGTG)n has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1I has 104 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTA)n has 30 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(T)n has 271 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_MamRep605 has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR33 has 56 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTB1 has 47 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSq has 159 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CT)n has 60 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1C has 104 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TG)n has 222 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_FAM has 40 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSq2 has 657 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3E has 48 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR33B has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER65D has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1D has 181 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1C has 80 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATATA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAA)n has 35 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA5 has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACTGT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAA)n has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_FLAM_C has 347 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_E has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSg has 559 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER1A has 41 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER21C has 66 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR41 has 37 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAA)n has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB8 has 137 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger12 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR37A has 16 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTT)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSg4 has 144 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER11B has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCATCC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME4b has 142 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluJr4 has 126 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U6 has 21 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER8 has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie29b has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTD has 62 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Low_complexity_GA-rich has 301 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSg7 has 83 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSz6 has 523 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie4z has 76 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAC)n has 33 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAT)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTT)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2B3 has 25 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER31-int has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER92-int has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34A has 24 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC3 has 70 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTA1 has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4A1 has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAACC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4E has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYc has 56 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4A has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCT)n has 31 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie30a has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACA)n has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER31B has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA4 has 39 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_FRAM has 244 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER112 has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/MULE-MuDR_Ricksha_0 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger4b has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie20a has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MD3 has 76 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYf1 has 30 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC4a has 65 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER39B has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME1 has 258 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTA)n has 16 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTTAA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR9B has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER5A has 252 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4E1 has 23 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E3 has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR37B has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1O has 30 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTA has 139 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER103C has 65 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR39 has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3B has 55 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA5 has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3D has 31 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P4 has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA2 has 23 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR22C2 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA15-16 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3A has 158 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA8A has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA8 has 75 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA10 has 27 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEd has 132 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_ERVL-int has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA7 has 27 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATA)n has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M7 has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_HAL1b has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1H1 has 28 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1B has 177 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1B-int has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1H1-int has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR64 has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1D has 65 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AG)n has 30 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACACACTCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Gln-CAA_ has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Ser-TCA(m) has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_MER124 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA11 has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATA)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATC)n has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTT)n has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTATTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER3 has 118 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER5A1 has 119 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3 has 63 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEg has 76 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC4 has 189 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR104_Mam has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_BLACKJACK has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M3 has 42 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR7 has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER67C has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAATG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR67B has 31 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR79 has 48 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie1b has 38 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie1a has 56 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger3a has 42 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER113A has 23 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACATACAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER44B has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Chap1a_Mam has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1C2 has 210 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M8 has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER102c has 27 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2d2 has 325 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger7 has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATT)n has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41D has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_HAL1 has 127 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1A1 has 57 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR78 has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTTT)n has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_D has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M4b has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(A)n has 191 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON76 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1B has 179 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC1 has 73 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2d has 176 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA3 has 32 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie19a has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME4a has 192 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCT)n has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR2C has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATGTG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATAGTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB4 has 41 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Satellite_BSR/Beta has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSc8 has 243 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER101-int has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LOR1-int has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR57-int has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_HERVK9-int has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER9a2 has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER102a has 35 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGATG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER67A has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER2 has 48 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_HERV16-int has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAG)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_X24_LINE has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEc has 125 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCAG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGC)n has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCT)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCC)n has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCG)n has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCC)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCC)n has 24 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTC)n has 25 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCC)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGA)n has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCGGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGC)n has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGGG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCACCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER63B has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCGTG)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAC)n has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAT)n has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4A1_ has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCT)n has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1G1 has 27 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYa5 has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MD has 60 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR12C has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCC)n has 16 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(C)n has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGCC)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCATC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCGGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCC)n has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR13A has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGCA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCAGG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCG)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger19b has 23 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEf has 52 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M4a2 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER49 has 36 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME2 has 115 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER50 has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSx4 has 143 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PB1 has 46 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCAGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCGG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_MamRep1151 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTG)n has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41B has 29 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER30 has 43 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Arthur1B has 16 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCATCCCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGGA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCCC)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCC)n has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR46 has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTG)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATC)n has 28 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCATGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER9a1 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CA)n has 154 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCG)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAGCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR13 has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR13_ has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER54A has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER68 has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGTCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_L3b has 66 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4B has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4B-int has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYe5 has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(G)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGC)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGG)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCT)n has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGCA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTGGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCC)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16B1 has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAGG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSq4 has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYc3 has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGTGAATG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYh3 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER20 has 196 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tag1_hAT-1_Mam has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER63D has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTG)n has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER66C has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYk3 has 67 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER66-int has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept srpRNA_7SLRNA has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYh9 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER74B has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR5_Hs has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGGTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCCCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR2B has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_Harlequin-int has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCTGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR75 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCTGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGAG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYa8 has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10A has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV9N-int has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVIP10F-int has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_MER131 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HUERS-P1-int has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR7B has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGG)n has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGGC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M1 has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie22a has 16 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGGCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER65A has 29 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER65-int has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER52A has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACA)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTG)n has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAT)n has 53 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER52C has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER83 has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAAA)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GC)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER113 has 39 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR26B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR42 has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4D has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCC)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCATC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M4c has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M4a1 has 28 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger1a_Art has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER65B has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCTCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYi6 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P5 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAC)n has 38 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Ac_OldhAT1 has 28 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC5 has 91 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGT)n has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACCCA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_ORSL-2b has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGTGCGGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYm1 has 39 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger1 has 62 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATG)n has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAACA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger16a has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Arthur1A has 16 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEb has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAA)n has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTT)n has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger15a has 37 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X26_DNA has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie15b has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger2 has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER44A has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER119 has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X7A_LINE has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER1B has 29 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie1 has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept rRNA_LSU-rRNA_Hsa has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CG)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCTCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACGCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTT)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACATGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16E1 has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_ERV3-16A3_I-int has 16 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_ERV3-16A3_LTR has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2D has 36 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB2 has 54 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCTG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie2b has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER81 has 53 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGAGT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER89 has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCC)n has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER91B has 21 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAA)n has 39 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER31A has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1A0 has 113 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTB has 64 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR18B has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie8 has 42 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAT)n has 23 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACAGCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAAC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER46C has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR81B has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR40a has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR81 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTT)n has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGAGGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER58B has 78 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER74A has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER63A has 31 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCA)n has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR52 has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga1 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGTGG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie16 has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2C1 has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCA)n has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger3c has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER91A has 28 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGTGA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGATGAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2B1 has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER47B has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB7 has 225 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACGCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGC)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/tRNA-Deu_AmnSINE2 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAG)n has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCAG)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTC)n has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/RTE-BovB_MamRTE1 has 50 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACGGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTTTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1A has 32 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACT)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER45B has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCTGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGG)n has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTT)n has 31 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGAG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTT)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR81C has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1J has 101 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger2a has 21 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAG)n has 25 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER66B has 23 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR41C has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34C_ has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER58C has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCCCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCGCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR26 has 21 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGCAGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTGGA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCACG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCCG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGA)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGCCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGG)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACATA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGCTCCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAAGAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCC)n has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTGGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTG)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGGCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCT)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATT)n has 21 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTT)n has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept scRNA_BC200 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR40c has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCTGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCCGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR19A has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCGC)n has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGAGTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MCc has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/5S-Deu-L2_AmnSINE1 has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTA-int has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_HERVL-int has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR27C has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger2b_Pri has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER117 has 47 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCTGGGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCAGGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_LTR106_Mam has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1H-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/PiggyBac_MER75 has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2B4 has 36 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger17c has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger17d has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGTGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie25 has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER51A has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER96 has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR40b has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCT)n has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTT)n has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E2 has 23 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACATGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_ERVL-B4-int has 23 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER107 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Arthur1C has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER45C has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1C-int has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCC)n has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCC)n has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT?_MER121 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA12 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYg6 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16A1 has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTB-int has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTGTC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MDa has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATG)n has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTTC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTTC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3Cz has 122 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME2z has 53 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA15 has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAT)n has 30 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTC)n has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACATG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGT)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTA)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Gly-GGA has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAAACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCATG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON16 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTA)n has 37 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGCCA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_Eulor10 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAT)n has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGT)n has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTACACATG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGTGTGCAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCA)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCTC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA10 has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_X30_DNA has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MC2 has 39 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAT)n has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGA)n has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamTip2b has 47 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCGGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGGGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGAAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTC)n has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON80_AMi has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACATG)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTG)n has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3C has 25 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEh has 25 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA5A has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGTTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCAAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACAGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACCTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10B2 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR21C has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTC)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR62 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAGC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGACA)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACCTCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1D-int has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCGG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER44C has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie4a has 33 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34C2 has 16 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER39 has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYh3a3 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Mariner_MADE2 has 21 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGGTG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGTGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Satellite_MSR1 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGCGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept RC/Helitron_Helitron3Na_Mam has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR5B has 16 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR45C has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGTG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGATGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger3d has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR8A has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR38 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR38-int has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_HERVK13-int has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR3B_ has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E1 has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACA)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR78B has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MB1 has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger4a has 23 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCGCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTGT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MD2 has 50 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER115 has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEi has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER77 has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR3A has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAT)n has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER77B has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR33C has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR85c has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga1a has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga1d has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR105_Mam has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2B2 has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR40A1 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_HERVL40-int has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/PiggyBac_MER85 has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1J1 has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCTG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER92B has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10E has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER63C has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16E2 has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCTAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E1A has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA13 has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga1b has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCTT)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1F1 has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/RTE-X_L4_B_Mam has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamRep4096 has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME5 has 31 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCACACACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCACTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER21B has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P2 has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR85a has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger19a has 36 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_HAL1ME has 24 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR24C has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA1 has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGG)n has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTC has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYb8 has 16 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER21A has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTACA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X6a_DNA has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MSTB2 has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCTG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTGCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCA)n has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATT)n has 34 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTTC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTC)n has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2A2 has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGACCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER48 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVH-int has 25 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PA17 has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PB4 has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR53B has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAT)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER61B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1ME3F has 45 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Leu-TTA has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1A0-int has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TT)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LOR1a has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAT)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR33A_ has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTC)n has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57B1 has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYh7 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGACT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16A2 has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR53 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X17_LINE has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGCA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER90 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTATAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR50 has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GA)n has 27 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1A2 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGTT)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL?_LTR89B has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER11A has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR81AB has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1B1 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER61D has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER61A has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Arthur1 has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X7B_LINE has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR8 has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100?_Eutr15 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA6 has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MamRep434 has 25 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACACACATGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PB2 has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P3 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_EUTREP8 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_CR1_Mam has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER45R has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTT)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCT)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger17a has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamTip1 has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGTT)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR101_Mam has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGT)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTCTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATCAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGCAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1G has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger11a has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER110 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1N2 has 29 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR66 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_HERVL66-int has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAA)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER54B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATATA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER70A has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCACAG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACAGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MD1 has 49 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypsy2-I has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATCCATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_LTR90B has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGTGAGGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGATGA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER20B has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAACC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCATGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATCAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAA)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/tRNA-RTE_MamSINE1 has 33 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16D has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1F has 31 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR24 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR24B has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57A1 has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATACGTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACATAC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10C has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1J-int has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Mariner_MADE1 has 33 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2A1 has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR48B has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34-int has 17 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR49-int has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Glu-GAA has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER70B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT?_MER121B has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/tRNA_LFSINE_Vert has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger9b has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_UCON49 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga2_a has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGATTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGG)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATA)n has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR1a has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTCCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGA)n has 16 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAT)n has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATG)n has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger23a has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTT)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEj has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/RTE-X_L4_A_Mam has 38 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT_MamRep38 has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PB3 has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR23 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_ERV24_Prim-int has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR23-int has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34B has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR54 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTC)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34C has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/PiggyBac_MER75A has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16A has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M6 has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER44D has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34A1 has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAATCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/RTE-X_L4_C_Mam has 25 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACACAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100?_MamRep1879 has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER94 has 24 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X12_DNA has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAAA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16B2 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCTCCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGCTG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTAT)n has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATC)n has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Zaphod3 has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTT)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAGAC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTATT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER58D has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamTip2 has 35 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR33A has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41A has 24 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR8B has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER5C has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON63 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGA)n has 32 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGAGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1C2-int has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger13a has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16D2 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_ORSL has 20 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Mariner_MARNA has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAG)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1G1-int has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR84b has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1C has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_THE1A-int has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTT)n has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAC)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATACA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_LTR91 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGTGG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGTGTGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGGTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR41B has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_LTR91A has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGA)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGA)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluSq10 has 21 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/Jockey_X12_LINE has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCAGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER105 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR19B has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGACCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVIP10FH-int has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie16a has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_FordPrefect_a has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER11C has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCACCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGACCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR85b has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR71B has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16D1 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA3 has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_X9_LINE has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATGGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGGGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCAGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie18a has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER51E has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATACA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER91C has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCACAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCTTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR86A1 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U2 has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR83 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR75_1 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER72 has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGGGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2-3_Crp has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON88 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTC)n has 19 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAAGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAAAA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie32a has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAAGAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAT)n has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1D-int has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCCAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER52D has 21 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_X15_LINE has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR12E has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATA)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACACAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCCCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGTGTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_MamRep564 has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCCC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAAAAAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAATA)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR21B has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVFH21-int has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR14B has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYk4 has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTATT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Cheshire has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_MamRep605b has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGTTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR12 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCTC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER101 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X7C_LINE has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTTT)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR36 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATACAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_MER126 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_MER130 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON22 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1M has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCCAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR71A has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U13_ has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/Penelope_Penelope1_Vert has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACATA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTTTG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTATTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger14a has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie7a has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MamRep137 has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAG)n has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie29a has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie17a has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Blackjack_MER94B has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAC)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATT)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_Eulor2A has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON20 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTCC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGGT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_CR1-3_Croc has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTT)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTCT)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR86A2 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATGAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER102b has 23 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X5B_LINE has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTATTAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X20_LINE has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U1 has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTG)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATAGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATATACAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACATTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCAGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/Dong-R4_Mam_R4 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTATC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAGCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2C2 has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/MULE-MuDR_Ricksha_c has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1G3 has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_X9a_DNA has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAGA)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_CR1-16_AMi has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER96B has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACTCA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCTGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACC)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTACTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1F has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON57 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCAGTGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie24 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGAG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGCCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGG)n has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTTT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/PiggyBac_MER75B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAACA)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACACG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAGTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept rRNA_5S has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGGTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAA)n has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER90a has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MA4A has 21 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGT)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATACC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATAT)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATA)n has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger3b has 22 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAAA)n has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Glu-GAG_ has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAACAA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Zaphod has 14 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER84 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER84-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept scRNA_HY1 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATCAC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCGCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MARE4 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAATAG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie10 has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR9D has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_F has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCTGAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie26a has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie21a has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR2c has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Ac_EuthAT-2 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGTAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGGG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR29 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_B has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATTTTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR1b has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAGAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTAA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGG)n has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie10a has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger16b has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGAGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGGTCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR86C has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U5 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCACTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2-2_Mam has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie2a has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGAAAA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTAA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_MER104 has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGAA)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_A has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAATA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga11a has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER5C1 has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATGAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAAGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie23a has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger9a has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie17 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATACTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTATA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MCb has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAATGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Retroposon/SVA_SVA_C has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAG)n has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc1_X32_DNA has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MCa has 27 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCT)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_MARE8 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER51B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV9-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR47A has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER9a3 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR82A has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR21A has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR77 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR61 has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAACT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER106B has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTAC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR56 has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTTT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4C has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41E has 10 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYe6 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVFH19-int has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER110A has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYd8 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_MER11D has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCAGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger10 has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_hAT-N1a_Mam has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR3a has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL?_Eutr10 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR26E has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAGAA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAAC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTATTT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamRep488 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCGCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2B5 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCACC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie7 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCTG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Low_complexity_polypurine has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Zaphod2 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAACAC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR9 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR60B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR2 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGCGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57C1 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTATT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER21-int has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYi6_4d has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAAT)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger4 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER47C has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTTT)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_ORSL-2a has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGCG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACA)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept RNA_7SK has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAAAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1D1 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR51 has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCTC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTTTATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc2_Kanga1c has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTAT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCTCTGTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCATT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAGCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Zaphod5a has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGTTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTTTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X7D_LINE has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAATT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER106A has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTCTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATAAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR84a has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAGAAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTGTT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGTAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_UCON14 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON70 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/Kolobok_UCON29 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie13a has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2F has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAATTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2-1_AMi has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATCTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCCCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCGTCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGCGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACAGA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCAGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCTC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT?_UCON105 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACATG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_UCON81 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATTTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT_UCON73 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAG)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGAGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamTip3 has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie4 has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR26C has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER2B has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAACC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTAAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc1_EutTc1-N2 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAAGGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar_X5a_DNA has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAC)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie13b has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTGG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCACTC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16 has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR43B has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCTCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCC)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGACAG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1?_LTR103_Mam has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCACG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTATA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR4 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR47B2 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTTTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCCA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X1_DNA has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAGCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCTGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCCCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tc1_X33a_DNA has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger22N1 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTTT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCACC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCTAGAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATGTG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept scRNA_HY3 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_ERV24B_Prim-int has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Mariner_HSMAR1 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCCGCCGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATTT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTTATTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER34B-int has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGATGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCTC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR75B has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTTTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACACCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTCTC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT_MamRep1894 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR27B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGGAGAGTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCAGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1C1 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER67B has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X6b_DNA has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_UCON34 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U3 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_Eutr11 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar_X4b_DNA has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MER97c has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MLT2E has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR65 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Mariner_HSMAR2 has 9 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger8 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER52-int has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR22B1 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV4_I-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Zaphod4a has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER68-int has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER70C has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR102_Mam has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10F has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAGA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER6 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U13 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger6a has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGAAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PRIMA4-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_HERVK-int has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACAGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41G has 13 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAATA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1HS has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACTT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR44 has 18 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR45B has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57A-int has 12 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCT)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR45 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M3f has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR57 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV3-int has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger6 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTAG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Satellite/centr_GSATII has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERVE-int has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTGAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCTAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAGAACAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAGAAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATAA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1C3 has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR7Y has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATATTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAAGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACATAT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGAGG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATATA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTGT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV9NC-int has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR12D has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCTTATA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LOR1b has 7 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR88a has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTCTT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER6B has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR14A has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACATTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGTTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCATA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_UCON58 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_MamTip1b has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTGGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER6C has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR22A has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger18a has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAATA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MST-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept SINE/Alu_AluYb9 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/MULE-MuDR_Ricksha has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/MULE-MuDR_Ricksha_a has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR80A has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTCTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie31a has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON35 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR86B1 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON41 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAACAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR1c has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR82B has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR88b has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATGTACATA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAAC)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept RC?/Helitron?_Helitron2Na_Mam has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAATTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1F-int has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL?_LTR55 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_X34_DNA has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGATAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAA)n has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER6A has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1I-int has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAGAG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR9A1 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATATG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger12c has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger12A has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_HERVL74-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCCC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON71_Crp has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_MER135 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Thr-ACA has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR32 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCTCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_CR1-1_Amn has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X1_LINE has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAAAA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR16B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCTCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MER127 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON65 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATCATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAATAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCACCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X6B_LINE has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR10D has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGGTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PRIMA4_LTR has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCTCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57E2 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR1d has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_CR1-L3A_Croc has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACAA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_UCON78 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_EUTREP2 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAATTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57F has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar_DNA1_Mam has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie17b has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U7 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1J1-int has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCTCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGATGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGG)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_MER129 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X6A_LINE has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGTCGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATT)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCAAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGTGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTGCCCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_MERX has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger17 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTAA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCCCA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_EUTREP16 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTATAAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTTCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGGCAG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCGGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR4 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER87 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR49 has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER51D has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Asn-AAC has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PRIMA41-int has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-His-CAY_ has 6 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Gly-GGG has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Val-GTG has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Gln-CAG has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTTTT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAACAAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCTG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCAGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTATA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAATAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR39-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X9b_DNA has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGAG)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGCTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57B2 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGTGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAGTAACCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTCCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR54B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR76 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGypLTR2b has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER50C has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Met_ has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PABL_B has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCTCTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR15 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGGAAAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCATTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR38B has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV-Fc2_LTR has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCGCGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER61-int has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGGCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTTTTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAAG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGCTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGAGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_LTR81A has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar_UCON44 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON47 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT?_UCON89 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCAGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Chap1_Mam has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept RC/Helitron_Helitron1Na_Mam has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept RC/Helitron_Helitron1Nb_Mam has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATTAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGACC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTA)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTATTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTGTTAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGATGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGA)n has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGAGGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGACCTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCACT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCACTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_Eutr18 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCAGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_X11_DNA has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_X23_DNA has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_UCON11 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGTCAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTACTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATGGA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER41-int has 15 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATTAGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TAATAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCTCTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1F1 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGACGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCCTT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCACC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGCAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTTAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCATG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/CR1_X8_LINE has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTGAAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCATCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AACACC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAACCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCACC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GACAGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCGCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTACT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_L2-1_Crp has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAGTGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4D0 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CATTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTTT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTATTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_MER30B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAGATA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAACT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTTAAATGACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HUERS-P3-int has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_Eutr2B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGCCCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAACAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_HERV35I-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept snRNA_U4 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR37-int has 11 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie30b has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR28B has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCATC)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAAAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGACCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie14a has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAACAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1MEg2 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTGTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_LTR14 has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVK_HERVK14C-int has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER66A has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy_MamGyp-int has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1A1-int has 8 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR46-int has 5 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1M2a has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER4-int has 26 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1P4e has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATCAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie9 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR26D has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L2_UCON86 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR_LTR107_Mam has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCTATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTAGGT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGACAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATT)n has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATGATG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA?_UCON21 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger20a has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCTCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCAGCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAATTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCACTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCCCGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCCCCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTGTTAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA_Eulor1 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR7C has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTTCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CGCCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAGTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCAATT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATCCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AATATAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_MER73 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTA)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACTAAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LINE/L1_L1PBa has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR06 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR1E has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR48 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGATAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAGCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTATG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTGGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAACC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCAGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100?_hAT-N1_Mam has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAACCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCCCTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAATC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATGTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGACAGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCAGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAAGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1E3-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PABL_A has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCTCTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTCTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_LTR28C has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGAAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL-MaLR_MLT1K-int has 4 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCGCGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTTTTT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER57-int has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACAGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCTCCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACACAG)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTCTGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept tRNA_tRNA-Val-GTY has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTATTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCTCTCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAATG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGGGGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CACCA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERVL_LTR47A2 has 3 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_UCON38 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TATTATA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tip100_Arthur2 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAGCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGCCCGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCTCT)n has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGGCT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar-Tigger_Tigger21a has 2 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTGTCC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR?_Eutr5 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GATTAAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGACTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGAAT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_MER50-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGTTTTA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/TcMar_X4a_DNA has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CCTCATT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCAAGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGCAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GTGCCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CAAGGGA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTCTCTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATATGTG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATAAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TACACA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAAGAAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GAGGGAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/ERV1_PABL_B-int has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept LTR/Gypsy?_LTR88c has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCGCGGC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Charlie_Charlie10b has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Unknown_UCON4 has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AGAGCAG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TCATTTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ATTTC)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(ACAGAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TTAACG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(TGGGT)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept DNA/hAT-Tag1_hAT-5_Mam has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GCCCGCG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(AAAGG)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(CTAAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "WARNING:tpcav.concepts:Concept Simple_repeat_(GGCCAA)n has 1 samples, fewer than min_samples=1000; skipping\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0001:GATA-PROP:GATA\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0002:PROP-ALX:Homeodomain\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0003:HNF1A-HNF1B:Homeodomain\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0004:ZSCAN:C2H2_ZF\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0005:POU3F-POU1F:Homeodomain,POU\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0078:CTCF-CTCFL:C2H2_ZF\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept AC0111:CTCF-KLF:C2H2_ZF\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept random_regions\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/MIR_MIR3\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept LINE/L2_L2a\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/MIR_MIR\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept LINE/L2_L2b\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept LINE/L2_L2c\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/MIR_MIRb\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/MIR_MIRc\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluJr\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluSx\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluSz\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluY\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluJb\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept SINE/Alu_AluSx1\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept Low_complexity_G-rich\n",
      "INFO:tpcav.tpcav_model:Sampled 10 activations from concept random_regions\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0001:GATA-PROP:GATA\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0002:PROP-ALX:Homeodomain\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0003:HNF1A-HNF1B:Homeodomain\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0004:ZSCAN:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 17\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6225\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6050\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.5300\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0005:POU3F-POU1F:Homeodomain,POU\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-06} | Iterations: 13\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6312\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6550\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6200\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-08} | Iterations: 13\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6306\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6550\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6200\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0078:CTCF-CTCFL:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 18\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6162\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.5900\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.5600\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 17\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7619\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8150\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6850\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0111:CTCF-KLF:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 15\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6331\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.5850\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.5600\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 19\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6619\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6750\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.5950\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0001:GATA-PROP:GATA\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0002:PROP-ALX:Homeodomain\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 22\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6787\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.6950\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6600\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0003:HNF1A-HNF1B:Homeodomain\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 25\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7306\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7150\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7100\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0004:ZSCAN:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-08} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6975\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7450\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6350\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0005:POU3F-POU1F:Homeodomain,POU\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 13\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.6737\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7250\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6900\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0078:CTCF-CTCFL:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 16\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8956\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8550\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8500\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 19\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7725\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7400\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7650\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0111:CTCF-KLF:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 16\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7462\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7400\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6850\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0001:GATA-PROP:GATA\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0002:PROP-ALX:Homeodomain\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0003:HNF1A-HNF1B:Homeodomain\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7612\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7700\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7250\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0004:ZSCAN:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-06} | Iterations: 19\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7963\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7750\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7600\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8594\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8550\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8100\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 12\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8131\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8000\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7800\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0005:POU3F-POU1F:Homeodomain,POU\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-06} | Iterations: 17\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7725\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7750\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7300\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0078:CTCF-CTCFL:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 17\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9712\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9700\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9450\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept AC0111:CTCF-KLF:C2H2_ZF\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8488\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8750\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7650\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/MIR_MIR3\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept LINE/L2_L2a\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/MIR_MIR\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept LINE/L2_L2b\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept LINE/L2_L2c\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/MIR_MIRb\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/MIR_MIRc\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluJr\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluSx\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluSz\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 24\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8035\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8081\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7424\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluY\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluJb\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 22\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7563\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7374\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 21\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7121\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7670\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7424\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7172\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept SINE/Alu_AluSx1\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 13\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7758\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8182\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7929\n",
      "INFO:tpcav.cavs:Submitted CAV training for concept Low_complexity_G-rich\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 23\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 24\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7506\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7475\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.7020\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7513\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7929\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6919\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 16\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.7462\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.7879\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.6768\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8923\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.8485\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8939\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 1e-08} | Iterations: 21\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9219\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9444\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9192\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 13\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9125\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9242\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.8737\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9628\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9747\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9343\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.01} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.8892\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9091\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9091\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9421\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9545\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9141\n",
      "INFO:tpcav.cavs:Best Params: {'alpha': 0.0001} | Iterations: 11\n",
      "INFO:tpcav.cavs:[train] Accuracy: 0.9717\n",
      "INFO:tpcav.cavs:[val] Accuracy: 0.9697\n",
      "INFO:tpcav.cavs:[test] Accuracy: 0.9495\n",
      "INFO:tpcav.cavs:Skipping CAV AC0003:HNF1A-HNF1B:Homeodomain with F-score 0.782 below threshold 0.900\n",
      "INFO:tpcav.cavs:Skipping CAV AC0002:PROP-ALX:Homeodomain with F-score 0.753 below threshold 0.900\n",
      "INFO:tpcav.cavs:Skipping CAV AC0001:GATA-PROP:GATA with F-score 0.696 below threshold 0.900\n",
      "INFO:tpcav.cavs:Skipping CAV AC0111:CTCF-KLF:C2H2_ZF with F-score 0.764 below threshold 0.900\n",
      "INFO:tpcav.cavs:Skipping CAV AC0005:POU3F-POU1F:Homeodomain,POU with F-score 0.724 below threshold 0.900\n",
      "INFO:tpcav.cavs:Skipping CAV AC0004:ZSCAN:C2H2_ZF with F-score 0.819 below threshold 0.900\n"
     ]
    },
    {
     "data": {
      "image/png": "[encoded data, 19728 characters]",
      "text/plain": [
       "<Figure size 1000x1000 with 4 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "import torch\n",
    "from tpcav import run_tpcav, helper\n",
    "device = 'cuda:0' if torch.cuda.is_available() else 'cpu'\n",
    "\n",
    "#==================== Prepare Model and Data transform function ================================\n",
    "class DummyModelSeq(torch.nn.Module):\n",
    "    def __init__(self):\n",
    "        super().__init__()\n",
    "        self.conv_layer_1 = torch.nn.Sequential(\n",
    "            torch.nn.Conv1d(4, 64, 25, padding=12, bias=True),\n",
    "            torch.nn.BatchNorm1d(64),\n",
    "            torch.nn.LeakyReLU()\n",
    "        )\n",
    "        self.conv_layer_2 = torch.nn.Sequential(\n",
    "            torch.nn.Conv1d(64, 128, 3, padding=1, stride=2, bias=True),\n",
    "            torch.nn.BatchNorm1d(128),\n",
    "            torch.nn.LeakyReLU(),\n",
    "        )\n",
    "\n",
    "        self.linear_layer_1 = torch.nn.Sequential(\n",
    "            torch.nn.Linear(512, 1),\n",
    "            torch.nn.LeakyReLU()\n",
    "        )\n",
    "        self.linear_layer_2 = torch.nn.Linear(128, 1)\n",
    "\n",
    "    def forward(self, seq):\n",
    "        y_hat = self.conv_layer_1(seq)\n",
    "        y_hat = self.conv_layer_2(y_hat)\n",
    "        y_hat = self.linear_layer_1(y_hat)\n",
    "        y_hat = y_hat.squeeze(-1)\n",
    "        y_hat = self.linear_layer_2(y_hat)\n",
    "        return y_hat\n",
    "\n",
    "# By default, every concept extracts fasta sequences and bigwig signals from the given region\n",
    "# Use your own custom transformation function to get your desired inputs\n",
    "# Here we transform them into one-hot coded DNA sequences\n",
    "def transform_fasta_to_one_hot_seq(seq, chrom):\n",
    "    # `seq` is a list of fasta sequences\n",
    "    # `chrom` is a numpy array of bigwig signals of shape [-1, # bigwigs, len]\n",
    "    return (helper.fasta_to_one_hot_sequences(seq),) # it has to return a tuple of inputs, even if there is only one input\n",
    "\n",
    "#==================== Construct concepts ================================\n",
    "motif_path = \"data/motif-clustering-v2.1beta_consensus_pwms.test.meme\" # motif file in meme format for constructing motif concepts\n",
    "bed_seq_concept = \"data/hg38_rmsk.sample.bed\" # a bed file to supply concepts described by a set of regions, format [chrom, start, end, label, concept_name]\n",
    "genome_fasta = \"data/hg38.analysisSet.fa\"\n",
    "model = torch.load(\"data/mcf7_ctcf_best.pt\", map_location=device, weights_only=False) # load the model\n",
    "layer_name = \"linear_layer_1\"   # name of the layer to be interpreted, you should be able to retrieve the layer object by getattr(model, layer_name)\n",
    "\n",
    "# concept_fscores_dataframe: fscores of each concept\n",
    "# motif_cav_trainers: each trainer contains the cav weights of motifs inserted different number of times\n",
    "# bed_cav_trainer: trainer contains the cav weights of the sequence concepts provided in bed file\n",
    "concept_fscores_dataframe, motif_cav_trainers, bed_cav_trainer = run_tpcav(\n",
    "    model=model,\n",
    "    layer_name=layer_name,\n",
    "    motif_file=motif_path,\n",
    "    motif_file_fmt='meme',  # specify your motif file format, either meme or consensus (tab delimited file in form [motif_name, consensus_sequence])\n",
    "    genome_fasta=genome_fasta,\n",
    "    num_motif_insertions=[12, 24, 36],\n",
    "    bed_seq_file=bed_seq_concept, \n",
    "    output_dir=\"test_run_tpcav_output/\",\n",
    "    input_transform_func=transform_fasta_to_one_hot_seq,\n",
    "    p=4) # number of concurrent SGDClassifier can be run at the same time, increase it if you have available CPU power, it speeds up training significantly"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "id": "dd86a288-3bcd-4e54-b441-c5b7db5ab982",
   "metadata": {},
   "outputs": [
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/home/jmy5455/miniforge3/envs/test/lib/python3.14/site-packages/captum/attr/_core/deep_lift.py:294: UserWarning: Input Tensor 1 did not already require gradients, required_grads has been set automatically.\n",
      "  gradient_mask = apply_gradient_requirements(inputs_tuple)\n",
      "/home/jmy5455/miniforge3/envs/test/lib/python3.14/site-packages/captum/log/dummy_log.py:39: UserWarning: Setting forward, backward hooks and attributes on non-linear\n",
      "               activations. The hooks and attributes will be removed\n",
      "            after the attribution is finished\n",
      "  return func(*args, **kwargs)\n",
      "INFO:tpcav.cavs:Skipping CAV AC0003:HNF1A-HNF1B:Homeodomain with F-score 0.782 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0002:PROP-ALX:Homeodomain with F-score 0.753 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0001:GATA-PROP:GATA with F-score 0.696 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0111:CTCF-KLF:C2H2_ZF with F-score 0.764 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0005:POU3F-POU1F:Homeodomain,POU with F-score 0.724 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIR3 with F-score 0.721 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2a with F-score 0.716 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIR with F-score 0.694 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2b with F-score 0.798 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2c with F-score 0.723 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIRb with F-score 0.686 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIRc with F-score 0.677 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0003:HNF1A-HNF1B:Homeodomain with F-score 0.782 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0002:PROP-ALX:Homeodomain with F-score 0.753 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0001:GATA-PROP:GATA with F-score 0.696 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0111:CTCF-KLF:C2H2_ZF with F-score 0.764 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV AC0005:POU3F-POU1F:Homeodomain,POU with F-score 0.724 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIR3 with F-score 0.721 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2a with F-score 0.716 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIR with F-score 0.694 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2b with F-score 0.798 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV LINE/L2_L2c with F-score 0.723 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIRb with F-score 0.686 below threshold 0.800\n",
      "INFO:tpcav.cavs:Skipping CAV SINE/MIR_MIRc with F-score 0.677 below threshold 0.800\n",
      "INFO:tpcav.cavs:PWM not found for Low_complexity_G-rich\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluSx1\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluSx\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluY\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluJb\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluJr\n",
      "INFO:tpcav.cavs:PWM not found for SINE/Alu_AluSz\n"
     ]
    },
    {
     "data": {
      "image/png": "[encoded data, 86964 characters]",
      "text/plain": [
       "<Figure size 1000x1000 with 7 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "image/png": "[encoded data, 41480 characters]",
      "text/plain": [
       "<Figure size 1000x1000 with 5 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "image/png": "[encoded data, 77052 characters]",
      "text/plain": [
       "<Figure size 1000x1000 with 14 Axes>"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    }
   ],
   "source": [
    "from tpcav import report\n",
    "\n",
    "#==================== Compuate layer attributions of target testing regions ================================\n",
    "# retrieve the tpcav model\n",
    "tpcav_model = bed_cav_trainer.tpcav\n",
    "\n",
    "# create input regions and baseline regions for attribution\n",
    "ctcf_peaks = helper.load_bed_and_center(\"data/MCF-7_CTCF_ENCFF942TCG.bed\", window=1024).sample(n=100)\n",
    "random_regions = helper.random_regions_dataframe(genome_fasta + \".fai\", 1024, 100, seed=2)\n",
    "\n",
    "# create iterators to yield one-hot encoded sequences from the region dataframes\n",
    "# adjust this funtion to fit your model input format requirements\n",
    "def pack_data_iters(df):\n",
    "    seq_fasta_iter = helper.dataframe_to_fasta_iter(df, genome_fasta, batch_size=8)\n",
    "    seq_one_hot_iter = (helper.fasta_to_one_hot_sequences(seq_fasta) for seq_fasta in seq_fasta_iter)\n",
    "    return zip(seq_one_hot_iter, )\n",
    "\n",
    "# compute layer attributions given the iterators of testing regions and control regions\n",
    "attributions = tpcav_model.layer_attributions(pack_data_iters(ctcf_peaks), pack_data_iters(random_regions))\n",
    "\n",
    "# generate a new html report with TPCAV score computed\n",
    "report.generate_tpcav_html_report(\"report_tpcav_score.html\", motif_cav_trainers,\n",
    "                               non_motif_cav_trainers = {'repeats': bed_cav_trainer},\n",
    "                               attributions = [attributions, ],  # if you have multiple sets of attributions you can provide a list\n",
    "                               motif_file=motif_path, motif_file_fmt='meme', fscore_thresh=0.8)\n",
    "\n",
    "# save the trainers for future use\n",
    "torch.save(motif_cav_trainers, \"motif_cav_trainers.pt\")\n",
    "torch.save(bed_cav_trainer, \"bed_cav_trainer.pt\")"
   ]
  }
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