# seqchromloader

seqchromloader aims to provide versatile and ready-to-use writer/loader for applying deep learning to bioinformatics study.

Plan to support dataset formats including:
- webdataset (done)
- tfrecord (x)

Training framework support:
- pytorch dataloader (done)
- pytorch-lightning datamodule (done)
- NVIDIA-DALI (x)

## Installation

### conda (suggested):

`mamba install -c bioconda -c conda-forge seqchromloader`

or

`conda install -c bioconda -c conda-forge seqchromloader`

### pip

`pip install seqchromloader`

## Usage

For detailed usage, please refer to [documentation](https://seqchromloader.readthedocs.io/en/latest/)
