Placeholder to remind me to fix this.
_____________________ test_clip_groupids_with_insideout_surface_returns_as_expected[groupids0-0] _____________________
aorta_centerline_branches = (vtkCommonDataModelPython.vtkPolyData)0x11cae9ca8
aorta_surface = (vtkCommonDataModelPython.vtkPolyData)0x11cae9e88, groupids = [0], paramid = '0'
compare_surfaces = <function compare_surfaces.<locals>.make_compare_surface at 0x11cad3950>
write_surface = <function write_surface.<locals>.make_write_surface at 0x11caee950>
@pytest.mark.parametrize("groupids,paramid", [
([0], '0'),
([2], '2'),
([3], '3'),
([0, 2], '02'),
([2, 3], '23'),
])
def test_clip_groupids_with_insideout_surface_returns_as_expected(aorta_centerline_branches, aorta_surface,
groupids, paramid, compare_surfaces, write_surface):
name = __name__ + '_test_clip_groupids_' + paramid + '_with_insideout_surface_returns_as_expected.vtp'
clipper = branchclipper.vmtkBranchClipper()
clipper.Centerlines = aorta_centerline_branches
clipper.Surface = aorta_surface
clipper.RadiusArrayName = 'MaximumInscribedSphereRadius'
clipper.BlankingArrayName = 'Blanking'
clipper.GroupIdsArrayName = 'GroupIds'
clipper.GroupIds = groupids
clipper.InsideOut = 1
> clipper.Execute()
test_vmtkScripts/test_vmtkbranchclipper.py:78:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <vmtk.vmtkbranchclipper.vmtkBranchClipper object at 0x11cb0d7f0>
def Execute(self):
if not self.Surface:
self.PrintError('Error: No input surface.')
if not self.Centerlines:
self.PrintError('Error: No input centerlines.')
if self.Interactive and not self.vmtkRenderer:
self.vmtkRenderer = vmtkrenderer.vmtkRenderer()
self.vmtkRenderer.Initialize()
self.OwnRenderer = 1
if self.Interactive:
self.vmtkRenderer.RegisterScript(self)
viewer = vmtkcenterlineviewer.vmtkCenterlineViewer()
viewer.Centerlines = self.Centerlines
viewer.CellDataArrayName = self.GroupIdsArrayName
viewer.vmtkRenderer = self.vmtkRenderer
viewer.InputText = self.InputText
viewer.OutputText = self.OutputText
viewer.PrintError = self.PrintError
viewer.PringLog = self.PrintLog
viewer.Display = 0
viewer.Execute()
groupIdsString = self.InputText("Please input groupIds to clip:\n",self.GroupIdsValidator)
self.GroupIds = [int(groupId) for groupId in groupIdsString.split()]
clipper = vtkvmtk.vtkvmtkPolyDataCenterlineGroupsClipper()
clipper.SetInputData(self.Surface)
clipper.SetCenterlines(self.Centerlines)
clipper.SetCenterlineGroupIdsArrayName(self.GroupIdsArrayName)
clipper.SetGroupIdsArrayName(self.GroupIdsArrayName)
clipper.SetCenterlineRadiusArrayName(self.RadiusArrayName)
clipper.SetBlankingArrayName(self.BlankingArrayName)
clipper.SetCutoffRadiusFactor(self.CutoffRadiusFactor)
clipper.SetClipValue(self.ClipValue)
clipper.SetUseRadiusInformation(self.UseRadiusInformation)
if self.GroupIds:
groupIds = vtk.vtkIdList()
for groupId in self.GroupIds:
groupIds.InsertNextId(groupId)
clipper.SetCenterlineGroupIds(groupIds)
clipper.ClipAllCenterlineGroupIdsOff()
else:
clipper.ClipAllCenterlineGroupIdsOn()
if not self.InsideOut:
clipper.GenerateClippedOutputOff()
else:
clipper.GenerateClippedOutputOn()
clipper.Update()
if not self.InsideOut:
self.Surface = clipper.GetOutput()
else:
> self.Surface = clipper.GetClippedOutputData()
E AttributeError: 'vtkCommonCorePython.vtkvmtkPolyDataCenterlineGroup' object has no attribute 'GetClippedOutputData'
Placeholder to remind me to fix this.