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Commits on Jul 20, 2023

• fix a bug related to uninitialized values in local mode

  yangao07

  committed
  6f6a06c

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Commits on Dec 8, 2022

• Merge branch 'main' of github.com:yangao07/abPOA into main

  yangao07

  committed
  d2e0186

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• fix an overflow bug when memory is > 32GB

  yangao07

  committed
  5219dc3

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Commits on Jul 23, 2022

• Merge pull request #40 from emollier/lintian-typos

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  yangao07

  authored
  5d19bc4

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• src/abpoa.c: fix possible typo in long options.

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  emollier

  committed
  c037798

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• src/abpoa.c: fix typo caught by lintian.

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  emollier

  committed
  6103c44

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• src/abpoa_align.c: fix likely typo bouns -> bonus.

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  emollier

  committed
  7ff81ee

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Commits on Jun 9, 2022

• v1.4.1

  yangao07

  committed
  16c64e5

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Commits on Mar 28, 2022

• leave gaps at the end of alignment (#36)

  yangao07

  committed
  5140da1

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Commits on Mar 23, 2022

• fix bugs in multi-cons

  yangao07

  committed
  4f92e7d

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Commits on Mar 22, 2022

• polish

  yangao07

  committed
  a5c5546

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• polish

  yangao07

  committed
  a00bfc2

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Commits on Mar 15, 2022

• Update README.md

  

  Yan Gao

  authored
  878c0d6

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• polish readme

  yangao07

  committed
  28e26b0

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• support multiple consensus sequences

  yangao07

  committed
  bfe4ac0

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Commits on Feb 25, 2022

• fix bug in jaccard similarity calculation (#35)

  yangao07

  committed
  fb0a6a1

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Commits on Feb 24, 2022

• for only 1 input sequence (#35)

  yangao07

  committed
  5d1d42f

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Commits on Feb 23, 2022

• again, bug fix for 0 minimizer hit (#35)

  yangao07

  committed
  6be7bb5

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Commits on Feb 22, 2022

• separate seeding and progressive tree building

  yangao07

  committed
  c1e7561

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• another bug caused by 0 minimizer hit (#35)

  yangao07

  committed
  89cd70d

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Commits on Feb 21, 2022

• fix another bug in progressive seeding (#35)

  yangao07

  committed
  d61fc46

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Commits on Feb 19, 2022

• fix bug in progressive mode (#35)

  

  Yan Gao

  committed
  8c66cc7

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Commits on Jan 12, 2022

• Update README.md

  

  Yan Gao

  authored
  dc20ca2

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• polish

  

  Yan Gao

  committed
  ddcf78c

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• fix pyabpoa

  

  Yan Gao

  committed
  3b1928e

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• v1.3.0

  

  Yan Gao

  committed
  13115db

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• Merge pull request #34 from yangao07/simde

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  Yan Gao

  authored
  b2c158f

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Commits on Jan 11, 2022

• fix cmakelists

  

  Yan Gao

  committed
  92e0f8a

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Commits on Dec 20, 2021

• fix pyabpoa

  

  Yan Gao

  committed
  e74cfad

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• polish makefile

  

  Yan Gao

  committed
  64f52ff

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• remove simd_flag and simd_check()

  

  Yan Gao

  committed
  2a4df7b

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Commits on Dec 18, 2021

• Merge pull request #31 from ComparativeGenomicsToolkit/arm

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  yangao07

  authored
  623eb1f

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Commits on Dec 17, 2021

• make sure to use AVX2 interface into simde with ARM

  glennhickey

  committed
  2cf6f87

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Commits on Dec 13, 2021

• hack simd_check to return avx2 on arm

  glennhickey

  committed
  9289c9b

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Commits on Dec 12, 2021

• use posix_mmalign and remove cpuid.h

  

  Yan Gao

  committed
  223c557

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