-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy path.gitignore
More file actions
97 lines (85 loc) · 1.48 KB
/
.gitignore
File metadata and controls
97 lines (85 loc) · 1.48 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
# Python
__pycache__/
*.py[cod]
*$py.class
*.so
*.egg
*.egg-info/
dist/
build/
.eggs/
# Virtual Environment
.venv/
.venv-docs/
venv/
ENV/
env/
# Jupyter
.ipynb_checkpoints/
*.ipynb_checkpoints
.jupyter/
.local/
# IDE
.vscode/
!.vscode/
.vscode/*
!.vscode/mcp.json
.idea/
*.swp
*.swo
*~
# Claude
.claude/
*.claude.json
claude_desktop_config.json
# Testing
.pytest_cache/
.coverage
htmlcov/
.tox/
# OS
.DS_Store
Thumbs.db
# Output files (keep structure, ignore generated reports)
output/*/
!output/.gitkeep
!output/paper_tables/
!output/paper_benchmark/
# Data files — ALL data is hosted on HuggingFace (MITCriticalData/ShortKit-ML-data)
# Nothing in data/ should ever be committed except README, .gitignore, .gitattributes
data/**/*.npy
data/**/*.pkl
data/**/*.csv
data/**/*.xlsx
data/**/*.h5
data/**/*.hdf5
data/celeba/
data/celeba_real/
data/chexpert/
data/chexpert_multibackbone/
data/mimic_cxr/
data/train.csv
data/valid.csv
data/chexpert_manifest.csv
# output/ — keep paper tables/figures/benchmark results, ignore generated reports and embeddings
output/**/*.html
output/test_embeddings.csv
output/test_embeddings.json
output/test_group_labels.csv
output/test_group_labels.json
output/test_labels.csv
output/test_labels.json
output/paper_benchmark/chexpert_embeddings/
output/paper_benchmark/chexpert_results/
output/comparison_*/
output/**/*.npy
output/**/*.pkl
# Paper drafts and roadmap (kept locally, not in repo)
docs-temp/
# MkDocs build output
site/
# Temporary files
*.log
*.tmp
temp/
tmp/