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%-fanDTasia ToolBox------------------------------------------------------------------ % This folder is part of the fanDTasia ToolBox: a Matlab library for Diffusion % Weighted MRI (DW-MRI) Processing, Diffusion Tensor (DTI) Estimation, High-order % Diffusion Tensor Analysis, Diffusion Kurtosis Imaging (DKI) Estimation, % Tensor ODF estimation, Visualization and more. % A Matlab Tutorial on DW-MRI can be found in: % http://www.cise.ufl.edu/~abarmpou/lab/fanDTasia/tutorial.php % %-USE-------------------------------------------------------------------------------- % % There are several DEMO files, which will guide you in the fanDTasia library. % Each DEMO filename starts with DEMO_..... and can be executed as a stand alone script. % The DEMO files are appropriately commented and contain user manual and examples. % %-DISCLAIMER------------------------------------------------------------------------- % You can use fanDTasia ToolBox for non commercial research and educational purposes % only without licensing fees and is provided without guarantee or warrantee expressed % or implied. You cannot repost this file without prior written permission from the % authors. If you use this software please cite the following papers accordingly. % % If you work on DKI please cite the following articles: % 1) A. Barmpoutis et al. "Diffusion Kurtosis Imaging: Robust Estimation from DW-MRI % using Homogeneous Polynomials", In the Proceedings of ISBI, 2011, pp. 262-265. % 2) A. Barmpoutis and B.C. Vemuri, "A Unified Framework for Estimating Diffusion % Tensors of any order with Symmetric Positive-Definite Constraints", % In the Proceedings of ISBI, 2010, pp. 1385-1388. % % If you simulate/synthesize DW-MRI datasets please cite the following article: % 1) A. Barmpoutis et al. "Adaptive kernels for multi-fiber reconstruction", % In the Proceedings of IPMI, 2009, pp. 338-349. % % If you work on DTI please cite the following articles: % 1) A. Barmpoutis, B. C. Vemuri, T. M. Shepherd, and J. R. Forder "Tensor splines for % interpolation and approximation of DT-MRI with applications to segmentation of % isolated rat hippocampi", IEEE TMI: Transactions on Medical Imaging, Vol. 26(11), % pp. 1537-1546. % 2) A. Barmpoutis and B.C. Vemuri, "A Unified Framework for Estimating Diffusion % Tensors of any order with Symmetric Positive-Definite Constraints", % In the Proceedings of ISBI, 2010, pp. 1385-1388. % % If you work on Higher-Order Tensors please cite the following articles: % 1) A. Barmpoutis et al. "Regularized Positive-Definite Fourth-Order Tensor Field % Estimation from DW-MRI", NeuroImage, Vol. 45(1 sup.1), 2009, pp. 153-162. % 2) A. Barmpoutis and B.C. Vemuri, "A Unified Framework for Estimating Diffusion % Tensors of any order with Symmetric Positive-Definite Constraints", % In the Proceedings of ISBI, 2010, pp. 1385-1388. % %-AUTHOR----------------------------------------------------------------------------- % Angelos Barmpoutis, PhD % Computer and Information Science and Engineering Department % University of Florida, Gainesville, FL 32611, USA % abarmpou at cise dot ufl dot edu %------------------------------------------------------------------------------------