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Commits on Dec 23, 2019

• Update README.md

  gpertea

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• Update README.md

  gpertea

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Commits on Dec 16, 2019

• bugfix release 2.0.6

  gpertea

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Commits on Dec 13, 2019

• Update TODO.md

  gpertea

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• Update and rename to_do.md to TODO.md

  gpertea

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• Update to_do.md

  gpertea

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• Create to_do.md

  gpertea

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• possible fix for the multi-threading problem?

  gpertea

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Commits on Dec 12, 2019

• clearing the bundle should be fully thread protected?

  gpertea

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Commits on Dec 7, 2019

• Update README.md

  gpertea

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Commits on Nov 30, 2019

• version bump to 2.0.5

  gpertea

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• removed -J option from curl fetch command

  gpertea

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Commits on Nov 29, 2019

• Merge pull request #252 from smoe/patch-1

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  gpertea

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• rm binary "all_tests" in source tree

  smoe

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Commits on Nov 21, 2019

• allow compilation with CentOS 6 gcc 4.4

  

  root

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Commits on Nov 6, 2019

• sync latest gff.h changes

  gpertea

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Commits on Nov 5, 2019

• added -S as alternative to --rseq

  gpertea

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Commits on Nov 4, 2019

• added --rseq/--refseq to load genome sequence data for each bundle

  gpertea

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Commits on Nov 1, 2019

• removing a few unneeded samtools files

  gpertea

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Commits on Oct 29, 2019

• updated prep_*.sh files to include prepDE.py

  gpertea

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• fixed -e bug for unstranded alignments; fixed TPM -nan

  gpertea

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Commits on Oct 14, 2019

• prepDE change default directory behavior ( "." instead of "ballgown"), added -e -G checks, -v

  gpertea

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Commits on Sep 23, 2019

• properly revert to default GffExon copy operator

  gpertea

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• Merge branch 'master' of github.com:gpertea/stringtie

  gpertea

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• fixed GffExon::operator=

  gpertea

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Commits on Sep 8, 2019

• added thread sanitizer target to Makefile

  gpertea

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• changed pthreads linking approach

  gpertea

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• traverse_dfs() proper fix (hopefully), v2.0.3

  gpertea

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Commits on Sep 5, 2019

• Update README.md

  gpertea

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• bumped version to 2.0.2b

  gpertea

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• minor fix for rare crash in v2.0.2

  gpertea

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Commits on Sep 4, 2019

• force downloading of test_data.tar.gz

  gpertea

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• fixed bug in 2.0.1

  gpertea

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• fixed bug in 2.0.1

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Commits on Aug 30, 2019

• memcheck passed, fixed small memory leak

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