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README.md

ARCHIVE

The modules in this directory are not actively maintained. They persist in this directory as a convenient marker for historical documentation, and to provide a starting point if future projects would like to resume development.

Removing unused modules from the primary directory reduces burden on slicer developers.

A short list of reasons why a module may be placed into the archive are as follows

  • Project that originally funded the extension is now complete
  • The extension has been superceeded with another, and is not recommended
  • The extension has no development support, and no longer runs properly

Optional extension documentation:

Date Extension Name Deprecation reason
2025-04-02 SlicerWMA Extension prevented Slicer from starting https://discourse.slicer.org/t/slicer-doesnt-open-after-installing-slicerwma-extension/42356
2024-11-16 SlicerOpenCV Extension failing build and no longer needed https://discourse.slicer.org/t/opencv-extension-build-fails-since-june-itk-upgrade/38158/2
2024-06-14 iGyne Unmaintained and incompatible with Slicer >- 5.2 due to its dependencies to the Annotations module.
2023-08-11 mpReview The extension is available again (it has been updated to use Segment Editor module instead of the removed Editor module).
2023-07-13 SegmentGeometry Extension was renamed to SlicerBiomech].
2022-03-29 DeepInfer Not updated for Python3. MONAILabel may be used instead.
2022-03-26 WASP Extension was not compatible with Python3 and ITK watershed segmentation is already available in SegmentEditorExtraEffects extension (with the limtiation that it does not precompute multiple levels).
2022-03-25 LongitudinalPETCT Extension build was failing due to dependency on removed module (Annotations, Editor, Charts)(QIICR/LongitudinalPETCT#17).
2022-03-25 MFSDA Extension build was failing and maintaners not responding.
2022-03-25 ResampleDTIlogEuclidean Extension build was failing and maintaners not merging the proposed fix.
2022-03-25 CBC_3D_I2MConversion Extension build was failing and not fixed for several years.
2022-03-25 MABMIS Extension build was failing and not fixed for several years.
2022-03-25 exStone Extension build was failing and maintaners not merging the proposed fix.
2022-03-25 SlicerAstro Extension build was failing and not fixed for a long time.
2022-03-25 GraphCutSegment Extension build was failing and maintaners not merging the proposed fix. Probably "Grow from seeds" effect in Segment Editor produces better results.
2022-03-25 LAScarSegmenter Extension build was failing and not fixed for a long time.
2022-03-25 LASegmenter Extension build was failing and maintaners not merging the proposed fix.
2022-03-25 ROBEXBrainExtraction Extension build was failing and maintaners not merging the proposed fix. HDBrainExtraction or SwissSkullStripper extensions can be used instead.
2022-03-25 LesionSimulator Extension build was failing and maintaners not merging the proposed fix.
2022-03-25 LesionSpotlight Extension build was failing and maintaners not merging the proposed fix.
2022-03-24 SlicerOpenCV Extension build was failing and not fixed for a long time. OpenCV is now available using pip, so the extension may not be needed anymore.
2022-03-24 SlicerPinholeCameras Extension build was failing and not fixed for a long time. Requires OpenCV.
2022-03-24 OpenCVExample Extension build was failing and not fixed for a long time. Requires OpenCV.
2022-03-24 SlicerVASST Extension build was failing and not fixed for a long time. Requires OpenCV.
2022-03-24 MarginCalculator Extension build was failing and not fixed for several years. SlicerRT extension offers related features, which can be further automated and extended using Python scripting to achieve similar features as this extension offered.
2022-03-22 IASEM Extension build was failing and not fixed for several years. Most modules have alternatives (Segment Editor, Segment Statistics), and more sophisticated solutions now for dealing with very large images (e.g. using multi-resolution tiles).
2022-03-22 FiberViewerLight Extension build was failing and not fixed for several years. SlicerDMRI extension has related features that might be used instead.
2022-03-22 DTIProcess Extension build was failing and not fixed for several years. SlicerDMRI extension has related features that might be used instead.
2022-03-22 DTIPrep Extension build was failing and not fixed for several years. SlicerDMRI extension has related features that might be used instead.
2022-03-22 DTI-Reg Extension build was failing and not fixed for several years. SlicerDMRI extension has related features that might be used instead.
2022-03-22 DTIAtlasFiberAnalyzer Extension build was failing and not fixed for several years. SlicerDMRI extension has related features that might be used instead.
2022-03-22 DTIAtlasBuilder Extension build was failing and not fixed for several years. SlicerDMRI extension has related features that might be used instead.
2022-03-22 ABC Extension build was failing and not fixed for several years. SlicerDMRI extension has related features that might be used instead.
2022-03-22 SlicerPathology Extension build was failing and not fixed for several years. More generic tools, such as Segment Editor module or MONAI Label extension can be used for pathology image segmentation.
2022-03-22 AutoTract Extension build was failing at submission and got no response from maintainers. SlicerDMRI extension has tractography features that might be used instead.
2022-03-17 FacetedVisualizer Extension build was failing and not fixed for several years. OpenAnatomy project has a similar web-based tool.
2022-03-17 LightWeightRobotIGT Extension build was failing and not fixed for several years. ROS-IGTL bridge can be used for interfacing the KUKA LWR robot with Slicer.
2022-03-16 VirtualFractureReconstruction Extension build was failing and not fixed for several years.
2022-03-16 Cardiac_MRI_Toolkit Extension build was failing and not fixed for several years. Segment Editor contains similar segmentation tools.
2022-03-16 Eigen Not used anymore in by any extensions. Eigen is already available in ITK and VTK.
2022-03-16 DiceComputation Extension build was failing at submission and was not fixed for several years. Dice score can be computed using Segment Comparison module in SlicerRT extension.
2022-03-16 RSSExtension Extension build was failing at submission and was not fixed for several years. Instead of robust statistics segmenter, "Grow from seeds" effect can be used in Segment Editor module.
2022-03-16 SupervisedSegmentation Extension build was failing at submission and was not fixed for several years.
2022-03-16 MultiLevelRegistration Extension build was failing at submission and was not fixed for several years. Since then SlicerElastix and SlicerANTs extensions were added that can be used for automatic image registration.
2022-02-04 SegmentationWizard Extension build was not fixed for over two years and only offering features that are also available with Slicer core modules.
2021-12-21 SliceTracker Relied on the now removed mpReview.
2021-12-21 mpReview Relied on the now removed Editor.
2020-12-13 WindowLevelEffect.s4ext Moved into Slicer core (window/level mouse mode).
2020-05-06 CardiacAgatstonMeasures Project no longer active, requires Slicer 4.9 or less features, new developer needed.
2020-04-18 Sequences Moved into Slicer core.
2018-11-05 FastGrowCutEffect The tool has been greatly improved and moved into the Segment editor. This old extension has not been maintained and failed to build.
2017-10-16 FinslerTractography Based on old and obsolete code. Improved version available as a standalone tool in https://github.com/tomdelahaije/fcm.
2017-09-22 SobolevSegmenter Unmaintained. This was a technology demo that was never completed.
2017-08-25 boost Unmaintained and unused extension that fail to build.
2017-04-24 Multi-LevelRegistration Unmaintained and failed to build on macOS.
2016-11-26 Reporting Renamed to QuantitativeReporting.
2016-06-06 ThingiverseBrowser Qt web browser API changed, which would have required significant refactoring of the extension.
2016-04-09 LumpNav Unlist LumpNav extension from the extension manager.
2015-09-11 T1_Mapping Replaced by new extension T1Mapping.
2015-05-18 TrackerStabilizer Replaced by new extension Slicer-TrackerStabilizer.
2015-03-28 MultidimData Renamed to Sequences.
2015-01-09 houghTransformCLI Unmaintained and unused (iGyne on standby). It needs to be updated to be compatible with VTK6.
2014-05-13 VMTKSlicerExtension Renamed to SlicerVMTK.
2014-04-17 TransformVisualizer Moved to Slicer core.
2014-04-09 PlusRemote Moved under SlicerIGT extension.
2014-01-30 KSlice Replaced by CarreraSlice.
2013-12-17 DataStore Moved to Slicer core as a RemoteModule.
2013-12-05 PathPlanner Superseded by PathExplorer extension.
2013-12-05 VisuaLine Superseded by PathExplorer extension.
2013-11-06 JsonCpp Removed because it was used only byTubeTK dependency. Later moved to Slicer core.
2013-11-06 TubeTk Removed waiting build issues are resolved.
2013-10-23 iGynePy Removed because source code not available anymore.
2013-05-08 VolumeResliceDriver Moved under SlicerIGT extension.
2012-10-24 SpatialObjects Removed because TubeTK will be added and will provide the functionality.