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setup.py
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84 lines (80 loc) · 3.19 KB
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################################
# Author : septicmk
# Date : 2015/07/24 09:37:15
# FileName : setup.py
################################
NAME="lambdaimage"
DESCRIPTION = "Image processing pipeline for lambdaimage"
LONG_DESCRIPTION = ''
MAINTAINER = 'septicmk'
URL = 'https://github.com/septicmk/lambdaimage'
LICENSE = 'BSD'
DOWNLOAR_URL = 'https://github.com/septicmk/lambdaimage'
with open('lambdaimage/__init__.py') as f:
for line in f:
if line.startswith('__version__'):
VERSION = line.strip().split()[-1][1:-1]
break
with open('requirements.txt') as f:
REQUIRE = [l.strip() for l in f.readlines() if l]
if __name__ == '__main__':
from setuptools import find_packages, setup
from setuptools.extension import Extension
from setuptools.command.build_ext import build_ext
import numpy
extensions =[
Extension("lambdaimage.udf._subtract_bg",
sources=["lambdaimage/udf/_subtract_bg.pyx","lambdaimage/udf/_subtract_bg_c.cpp"],
inlcude_dirs=[numpy.get_include()],
language="c++"),
Extension("lambdaimage.udf._trans",
sources=["lambdaimage/udf/_trans.pyx","lambdaimage/udf/_trans_c.c"],
include_dirs=[numpy.get_include()]),
Extension("lambdaimage.udf._update",
sources=["lambdaimage/udf/_update.pyx", "lambdaimage/udf/_update_c.c"],
include_dirs=[numpy.get_include()]),
Extension("lambdaimage.udf._moment",
sources=["lambdaimage/udf/_moment.pyx"],
inlcude_dirs=[numpy.get_include()]),
Extension("lambdaimage.udf._intensity",
sources=["lambdaimage/udf/_intensity.pyx"],
include_dirs=[numpy.get_include()]),
Extension("lambdaimage.udf._phansalkar",
sources=["lambdaimage/udf/_phansalkar.pyx", "lambdaimage/udf/_phansalkar_c.c"],
include_dirs=[numpy.get_include()]),
]
from Cython.Build import cythonize
extensions = cythonize(extensions)
setup(
name = NAME,
description = DESCRIPTION,
long_description = LONG_DESCRIPTION,
maintainer = MAINTAINER,
maintainer_email = MAINTAINER_EMAIL,
url=URL,
license = LICENSE,
download_url = DOWNLOAR_URL,
version = VERSION,
classifiers = [
'Development Status :: 4 - Beta',
'Environment :: Console',
'Intended Audience :: Developers',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: BSD License',
'Programming Language :: C',
'Programming Language :: C++',
'Programming Language :: Python',
'Topic :: Software Development :: Libraries',
'Topic :: Scientific/Engineering',
'Topic :: Scientific/Engineering :: Bio-Informatics',
'Operating System :: Microsoft :: Windows',
'Operating System :: POSIX',
'Operating System :: Unix',
'Operating System :: MacOS',
],
install_requires = REQUIRE,
packages = find_packages(),
cmdclass = {'build_ext': build_ext},
ext_modules = extensions
)