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Commits on Mar 9, 2026

• Refactor taxonomy_boldigger3.sh script

  alihkz94

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  c96545c

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Commits on Mar 6, 2026

• Add BOLDigger3 taxonomy assignment feature with Docker and script

  alihkz94

  committed
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Commits on Jan 28, 2026

• modification in log messages in processing scripts for consistency

  alihkz94

  committed
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Commits on Jan 27, 2026

• Refactor README output formatting in FunBarONT pipeline

  alihkz94

  committed
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• Update success message and README file structure in FunBarONT pipeline

  alihkz94

  committed
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• wording change

  alihkz94

  committed
  ec0a2f9

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• parameter clarity updates

  alihkz94

  committed
  13f62dc

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• Remove root FunBarONT folder - not needed for PipeCraft functionality

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  alihkz94

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Commits on Jan 21, 2026

• Merge pull request #11 from pipecraft2/copilot/disable-email-notifications

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  METS0JA

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Commits on Jan 6, 2026

• tool's parameters explanation improved

  alihkz94

  committed
  169a508

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• Update FunBarONT taxonomy assignment GUI to match QuickTools BLAST section

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  alihkz94

  committed
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Commits on Jan 5, 2026

• Remove unused pipelineConfig variable from getFunBarONTBinds method

  alihkz94

  committed
  075290c

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• Refactor FunBarONT workflow to embed results aggregation script inline and enhance output publishing

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  alihkz94

  committed
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Commits on Jan 2, 2026

• Update workflow to manual trigger only to stop automatic email notifications

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  Copilot

  and

  alihkz94

  committed
  938738c

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• Initial plan

  Copilot

  committed
  7b574ce

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• Update script path to use absolute reference for results aggregation in workflow

  alihkz94

  committed
  78b549a

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Commits on Dec 29, 2025

• Enhance FunBarONT pipeline logging and error handling. Update configuration and input validation for improved robustness.

  alihkz94

  committed
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• Enhance error messaging in barcode results aggregation process to specify failure reasons for improved debugging

  alihkz94

  committed
  34f7bcd

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• Taxanomy assignment GUI fixed. Update InputNumeric component to support dynamic input types and adjust layout in Pipeline and Step views

  alihkz94

  committed
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Commits on Dec 16, 2025

• Add FunBarONT pipeline modules and main workflow

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  alihkz94

  committed
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• Docker file for FunBarONT developed and modicfication in pipeline so it be compatable with pipecraft

  alihkz94

  committed
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Commits on Sep 17, 2025

• gitignore

  anslan

  committed
  e81506f

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• upload test dataset for OptimOTU

  anslan

  committed
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Commits on Jul 29, 2025

• add allowOneOff for DADA2 chim filt, and add additionall messages for log files

  anslan

  committed
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Commits on Jul 10, 2025

• disable auto-test

  anslan

  committed
  99e3c6b

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• extension to fileFormat

  anslan

  committed
  651f070

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• bug fix when using dual indexes; extension to fileFormat in py module

  anslan

  committed
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Commits on Apr 17, 2025

• NextITS(v1.0.0), metamate fixes, QC pull progress, file detection/selection updates, Swal desing, assigning cores from RM, QuickTools mandatory inputs fixes

  

  Martin Metsoja

  authored and

  Martin Metsoja

  committed
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Commits on Apr 3, 2025

• merged 1.1.0_mac

  

  Martin Metsoja

  authored and

  Martin Metsoja

  committed
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• Vue devtools from crx

  

  Martin Metsoja

  authored and

  Martin Metsoja

  committed
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Commits on Apr 2, 2025

• macOS minor changes

  

  Martin Metsoja

  authored and

  Martin Metsoja

  committed
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Commits on Mar 31, 2025

• Update README.md

  anslan

  authored
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Commits on Mar 11, 2025

• qs2 install for arm64

  

  Martin Metsoja

  authored and

  Martin Metsoja

  committed
  9701542

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• macOS branch for build

  

  Martin Metsoja

  authored and

  Martin Metsoja

  committed
  f1b2770

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• dada2 qFilt tooltip for maxN

  anslan

  committed
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