NERC Constructing a Digital Environment https://digitalenvironment.org NERC Constructing a Digital Environment Wed, 06 Sep 2023 11:57:17 +0000 en-GB hourly 1 https://wordpress.org/?v=6.9.4 https://i0.wp.com/digitalenvironment.org/wp-content/uploads/2019/05/cropped-nerc-flower-graphic.png?fit=32%2C32&ssl=1 NERC Constructing a Digital Environment https://digitalenvironment.org 32 32 161430594 Digital – the key to unlocking Environmental Challenges’ event – a great success https://digitalenvironment.org/digital-the-key-to-unlocking-environmental-challenges-event-a-great-success/?utm_source=rss&utm_medium=rss&utm_campaign=digital-the-key-to-unlocking-environmental-challenges-event-a-great-success Wed, 06 Sep 2023 11:08:07 +0000 https://digitalenvironment.org/?p=7667 What a great day at the Royal Society in London for the ‘Digital – the key to unlocking Environmental Challenges’ event. All the planning for this key stakeholder event came good and we had a fantastic day of presentations, panels sessions and exhibits from all the supported research teams.

A collective audience of some 110 delegates joined us, drawn from over 60 organisations, all with an interest in the role and opportunity of digital approaches in supporting environmental decision making.

This event marks the culmination of the ‘CDE’ programme, the ‘Constructing a Digital Environment’, which commenced way back in 2018. Digital Environmental Science has developed apace since those early days and the future opportunities are bright. The Royal Society was a fitting venue to conclude our SPF CDE.

@SPFDigiEnv

@NERCscience

#DUEC

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Towards high resolution FAIR data in the Western Channel Observatory; Demonstrator interface now live! https://digitalenvironment.org/towards-high-resolution-fair-data-in-the-western-channel-observatory-demonstrator-interface-now-live/?utm_source=rss&utm_medium=rss&utm_campaign=towards-high-resolution-fair-data-in-the-western-channel-observatory-demonstrator-interface-now-live Wed, 06 Sep 2023 09:12:21 +0000 https://digitalenvironment.org/?p=7664 The Western Channel Observatory (WCO) is an oceanographic time-series and marine biodiversity reference site that provides a valuable source of data to a wide range of UK research, policymaker, public and businesses communities. Recently emerging sensor and platform technologies have proven their abilities to increase both the spatial and time resolution of these data. While this additional data will allow current applications to evolve and improve their capabilities, a new generation of innovative digital solutions such as digital twins or higher level artificial intelligence (AI) and machine learning (ML) applications require the creation of new, scalable, robust and mature data pipelines that focus on the need to make data truly findable, accessible, interoperable and reusable (FAIR).

This Constructing Digital Environment (CDE) mini-demonstrator project has allowed the WCO team to collaborate with data providers, data users and data archiving centres to identify, investigate and trial approaches to increase the FAIR-ness of marine observation data. Focussing on the observatory’s L4 CTD (conductivity, temperature, depth) data, the project has developed a range of intuitive data visualisation and exploration tools that seamlessly access PML and BODC datasets.

In the addition to the toolsets that are now available to support the public exploration of the WCO’s CTD data (here…) the project released a reusable Reference Architecture that documents the project’s design approach and provides a valuable resource to guide the development of the CDE communities’ other FAIR near real-time marine environmental datasets. 

Keywords: FAIR; Data and data management; Metadata; Marine; Visualisation

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NERC ‘Digital, Unlocking Environmental Challenges’ event at the Royal Society, London on Sept 5th. https://digitalenvironment.org/nerc-digital-unlocking-environmental-challenges-event-at-the-royal-society-london-on-sept-5th/?utm_source=rss&utm_medium=rss&utm_campaign=nerc-digital-unlocking-environmental-challenges-event-at-the-royal-society-london-on-sept-5th Wed, 23 Aug 2023 10:20:19 +0000 https://digitalenvironment.org/?p=7573 Just a fortnight to go until the NERC ‘Digital, Unlocking Environmental Challenges’ event at the Royal Society, London on Sept 5th. Free registration and details at https://digitalenvironment.org/digital-the-key-to-unlocking-environmental-challenges/ – the event is all about how digital tools support sound environmental decision making. @SPFDigiEnv @NERCscience
#DUEC

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CDE Webinar – Tom Andersson, Tackling diverse environmental prediction tasks with neural processes https://digitalenvironment.org/cde-webinar-andersson/?utm_source=rss&utm_medium=rss&utm_campaign=cde-webinar-andersson Fri, 04 Aug 2023 11:00:40 +0000 https://digitalenvironment.org/cde-webinar-august-2/ Tom is an ML Research Scientist at the British Antarctic Survey (BAS) AI Lab, where he researches and develops ML systems for monitoring and adapting to climate change. His work currently focusses on the application and implementation of neural processes in environmental sciences. Tom has used uncertainty quantification, interpretability, and active learning methods to build decision-support tools and his previous work includes IceNet, a sea ice forecasting AI system.

In this webinar, Tom will present recent advances and applications of neural processes (NPs) in environmental sciences. NPs are versatile deep learning models which can tackle a diverse array of environmental prediction problems, including sensor placement, downscaling, forecasting, and infilling missing satellite data. This versatility is enabled by modelling flexibility: NPs can ingest arbitrary sets of observations of point-based or gridded modalities, predict at arbitrary locations, and quantify prediction uncertainty. However, the flexibility of NPs can make them poorly suited to small-data settings, and open questions remain about how to optimise their performance. To answer these questions and accelerate research, Tom is developing an open-source Python package for environmental NP modelling, DeepSensor, which will be presented in this webinar.

Further information and details, this and the wider webinar series is online at https://digitalenvironment.org/webinars/cde-webinar-series-upcoming/#andersson.

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CDE Webinar – Prof Iain Styles, AI for biological imaging and sensing https://digitalenvironment.org/cde-webinar-styles/?utm_source=rss&utm_medium=rss&utm_campaign=cde-webinar-styles Fri, 14 Jul 2023 11:00:40 +0000 https://digitalenvironment.org/cde-webinar-arcucci-2/ Iain Styles is Professor of Computer Science at Queen’s University Belfast. He was previously at the University of Birmingham, where he was the Founding Director of the Institute for Interdisciplinary Data Science and AI, Turing University Lead, and PI and Director of the EPSRC-funded Baskerville Tier 2 High Performance Computing Facility. His principle research interest is imaging and image analysis with a particular focus on applications in biology and medicine, and he works across a wide range of imaging modalities to develop new techniques for understanding, extracting, and summarising the content of content-rich high dimensional image data.

In this talk, we will survey state-of-the-art approaches to the analysis of imaging and sensing data from the biological and medical sciences. Our focus will be on understanding what problems have robust solutions, which problems are still very much open, and what types of approach are showing promise on the most difficult problems. Links will be drawn to imaging and sensing in the environmental sciences, with areas of potential for greater collaboration identified.

Further information and details, this and the wider webinar series is online at https://digitalenvironment.org/webinars/cde-webinar-series-upcoming/#styles .

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The NERC #DG23 ‘Digital Gathering 23’ Hackathon event finishes https://digitalenvironment.org/the-nerc-dg23-digital-gathering-23-hackathon-event-finishes/?utm_source=rss&utm_medium=rss&utm_campaign=the-nerc-dg23-digital-gathering-23-hackathon-event-finishes Fri, 14 Jul 2023 08:00:37 +0000 https://digitalenvironment.org/?p=7176 The NERC Digital Gathering #DG23 Hackathon event, held following the conference has now finished. We adopted a ‘collaborative’ approach to this year’s hackathon, with two groups of experienced instructors helping to facilitate the delegates to use the software tools and computational environments on offer to further their research. Expert Network member Prof. Richard Reeve and team helped delegates learn about the FAIR Data Pipeline tools they have developed, with Expert Network member Dr Claire Harris providing delegates with worked example case studies of biological system modelling to show the tools in practice. The FAIR Data Pipeline (https://www.fairdatapipeline.org) is intended to enable tracking of provenance of FAIR (findable, accessible, interoperable and reusable) data used in modelling. Pipeline APIs written in C++, Java, Julia, Python and R can be called by modelling software for data ingestion. These interact with a local relational database storing metadata and the local filesystem, and are configured using a yaml file associated with the model run. Local files and metadata can be synchronised with a remote registry via a command line tool.

Also co-leading the Hackathon event were Matt Pritchard and colleagues from the STFC JASMIN team. JASMIN is NERC’s globally-unique data analysis facility, providing storage and compute facilities to enable data-intensive environmental science. Delegates were walked through migrating existing modelling approaches onto first the interactive shell, then the batch environments in JASMIN, plus the use of the interactive Jupyter Notebook environment. Also covered was how models can make use of and draw upon the extensive data holdings of the CEDA archives.

Overall the hackathon was a great success and highlighted the value of bringing a group of digitally-enabled scientists together with expert instructors to move forward their research techniques. We would like to see far more of this sort of offering in the future. Particular thanks go to the instructor teams.

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The NERC #DG23 ‘Digital Gathering’ Hackathon now underway https://digitalenvironment.org/dg23-hackathon-underway/?utm_source=rss&utm_medium=rss&utm_campaign=dg23-hackathon-underway Wed, 12 Jul 2023 21:26:41 +0000 https://digitalenvironment.org/?p=7145 Following the successful #DG23 Digital Gathering conference, comes the the ‘Constructing a Digital Environment’ Digital Gathering 23 Hackathon, where the first day has now completed (https://lnkd.in/ewmVU7FW). Held at Churchill College, Cambridge, the hackathon is led by Digital Environment Expert Network member Prof Richard Reeve, Professor of Population and Ecosystem Health and team from the University of Glasgow, together with Matt Pritchard, JASMIN Operations Manager and experts from the NERC JASMIN team. The Hackathon delegates have been exploring the FAIR Data Pipeline (https://lnkd.in/eSZkxKQa), intended to enable tracking of provenance of FAIR (findable, accessible, interoperable and reusable) data used in modelling. Also underway, delegates are learning how to port their models to run on the JASMIN data intensive supercomputer for environmental science. JASMIN is a shared resource for NERC’s environmental science community, encouraging communication and inter-disciplinary working between diverse scientific groups within that community, helping reduce duplication of data, effort and resources.

Delegates at the DG23 Hackathon, July 12-13, Churchill College, Cambridge
Delegates at the DG23 Hackathon, July 12-13, Churchill College, Cambridge
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The NERC #DG23 ‘Digital Gathering 23’ now drawn to a successful conclusion https://digitalenvironment.org/the-nerc-digital-gathering-23-now-drawn-to-a-successful-conclusion/?utm_source=rss&utm_medium=rss&utm_campaign=the-nerc-digital-gathering-23-now-drawn-to-a-successful-conclusion Wed, 12 Jul 2023 21:03:56 +0000 https://digitalenvironment.org/?p=7141 The NERC ‘Digital Gathering 23’ has now drawn to a successful conclusion, organised through the ‘Constructing a Digital Environment’ programme. Held at the British Antarctic Survey, Cambridge on 10-11th July, the #DG23 International conference hosted a series of excellent oral presentation, spotlight talks, posters and masterclass workshops focussing on four of the core themes of NERC’s ‘Digital Strategy’ – Next-generation sensing, Data science tools and techniques, Environmental data – collection and governance, and Building Confidence and trust, people and skills. We will place talks on our YouTube channel soon. Thanks to everyone who contributed to the event, and particular thanks to BAS for both the excellent venue and sharing their advanced work in environmental AI. @SPFDigiEnv @NERCScience

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CDE Webinar – Dr Rossella Arcucci, Data Learning: Integrating Data Assimilation and Machine Learning for reliable AI models https://digitalenvironment.org/cde-webinar-arcucci/?utm_source=rss&utm_medium=rss&utm_campaign=cde-webinar-arcucci Fri, 23 Jun 2023 11:00:40 +0000 https://digitalenvironment.org/cde-webinar-august-2/ Dr Rossella Arcucciis a Lecturer in Data Science and Machine Learning at Imperial College London (ICL). She is an elected member of the World Meteorological Organization and the elected speaker of the AI Network of Excellence at ICL where she represents more than 270 academics working on AI. She has been with the Data Science Institute at ICL since 2017 where she has created, and she leads the Data Assimilation and Machine Learning (Data Learning) group.

In this talk Rossella introduces Data Learning, a field that integrates Data Assimilation and Machine Learning. Data assimilation (DA) is a techniques used to develop digital twins, considering the uncertainties of both model and data. However, these approaches are linear and are often incapable of fully representing real world situations. Machine learning (ML) shows great capability in approximating nonlinear systems and extracting meaningful information from high dimensional data. Integration of ML with DA increases the reliability of prediction by including information in real time and with a physical meaning.

Further information and details, this and the wider webinar series is online at https://digitalenvironment.org/webinars/cde-webinar-series-upcoming/#arcucci .

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Generative AI Art https://digitalenvironment.org/generative-ai-art/?utm_source=rss&utm_medium=rss&utm_campaign=generative-ai-art Tue, 13 Jun 2023 19:08:57 +0000 https://digitalenvironment.org/?p=6148 There’s been a lot in the press and media in recent weeks about ‘Generative AI’ and the increasingly well-known Open-AI chat bot agent ‘Chat GPT’ and its like. There are now a number of these agents out there to try, a recent addition to the pack is Google’s ‘Bard’ large language model chatbot. Educational establishments have to contend with students using these tools for their assignments. Equally, the tools can also offer environmental researchers a useful structure and starting point in their work.

Another genre of generative AI perhaps less well known is that of image and media creation. Where this has touched the news is around ‘deep fake’ images that are increasingly hard to distinguish from human-generated output.

It is one thing to have a textual summary of a topic, or a meaningful exchange with a chatbot, there is however something of deeper connection with the human psyche to see images, and in fact works of art, produced by AI. There are a number of generative AI-based image creation tools out there, images.ai was an early entrant, and other tools such as NightCafe and starry.ai are also popular. Adobe Firefly is another recent addition, and there are many more.

OpenAI, the creators ChatGPT have released an AI image generator called DALL-E, which will create new imagery from simple text descriptions. With a focus on what Digital Environment can mean, and to discussions above here – we had a go and the results were striking.  One can use natural language to describe a scene and then the AI tool will interpret this for us, thus:

A oil painting of a robot digging the soil in woodland with butterflies

We’re not sure what that last robot is up to!!!

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