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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 378 165

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 26 15

Repositories

Showing 10 of 472 repositories
  • HeavyRNN_public Public

    Code for Slow Transition to Low-Dimensional Chaos in Heavy-Tailed Recurrent Neural Networks (NeurIPS 2025)

    AllenInstitute/HeavyRNN_public’s past year of commit activity
    Python 20 4 0 0 Updated Mar 16, 2026
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder’s past year of commit activity
    TypeScript 16 BSD-3-Clause 4 94 3 Updated Mar 16, 2026
  • aibs-informatics-aws-utils Public

    Library of generic Python AWS utils used by the AIBS Informatics "Marmot" team

    AllenInstitute/aibs-informatics-aws-utils’s past year of commit activity
    Python 1 0 2 1 Updated Mar 16, 2026
  • deep_ccf_registration Public

    Arbitrary modality registration to CCFv3 using deep learning

    AllenInstitute/deep_ccf_registration’s past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated Mar 16, 2026
  • connectomics_at_cosyne Public

    Workshop description and resources for Connectomics at COSYNE 2026 .

    AllenInstitute/connectomics_at_cosyne’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Mar 16, 2026
  • biorealistic-v1-model Public
    AllenInstitute/biorealistic-v1-model’s past year of commit activity
    Python 0 BSD-3-Clause 0 4 0 Updated Mar 14, 2026
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES’s past year of commit activity
    IGOR Pro 29 9 280 11 Updated Mar 13, 2026
  • openscope_databook Public

    OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈

    AllenInstitute/openscope_databook’s past year of commit activity
    Python 74 28 9 0 Updated Mar 13, 2026
  • aibs-informatics-aws-lambda Public

    AWS Lambda library for AIBS Informatics lambda functions

    AllenInstitute/aibs-informatics-aws-lambda’s past year of commit activity
    Python 1 0 0 0 Updated Mar 13, 2026
  • cell_type_mapper Public

    Repository for storing prototype functionality implementations for the BKP

    AllenInstitute/cell_type_mapper’s past year of commit activity
    Python 47 9 7 2 Updated Mar 13, 2026
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