Skip to content

Blank line added in nastruct command #803

@rodrigogalindo

Description

@rodrigogalindo

For some reason the nastruct command is inserting a blank line between frames in the output.

cpptraj input:

noexitonerror                                                                                                                                                                                                      
parm ../nowater.topo                                                                                                                                                                                               
trajin ../nowater.nc 1 last 1                                                                                                                                                                                      
check @N1,N2,P,OP1,OP2,C1',C2',C3',C4',O3',O4' skipbadframes silent                                                                                                                                                         
nastruct NA naout nastruct_7-22.dat resrange 7,22

The output file:

#Frame      Base1    Base2      Shear    Stretch    Stagger     Buckle  Propeller    Opening BP HB      Major      Minor
       1        7       22    -0.4610     0.1556    -0.0528    -2.7232   -28.0909    -6.0154  1  2    20.5510    12.9459

       2        7       22     0.0974    -0.0146     0.0902    -8.7775   -28.5898    -1.1895  1  2    20.4636    12.3266

       3        7       22    -0.2395     0.0476    -0.1613    -0.4146   -20.6477    12.6830  1  2    19.6668    11.4523

       4        7       22    -0.2351     0.0731     0.5579   -19.1843   -22.4834     8.5296  1  2    20.6498    12.3491

       5        7       22    -0.1675    -0.0232     0.0929     5.6684   -19.6771    -5.2094  1  2    20.4131    12.7405

cpptraj version 18.01.
It is not really an issue, it just takes an extra step to do the analysis. Maybe it is supposed to be like that?
Thanks!

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions