* Fix/top k (#2228)

* add linear top_k implementation

* update top_k to use new linear top_k implementation

* cleanup

* chore: apply tidy-public auto-fixes

---------

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* Fix/fastrp (#2229)

* update fastrp to properly average embeddings instead of just summing

* fix import issue

* add helper function to test pairwise distances

* cleanup and update python test

* chore: apply tidy-public auto-fixes

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>

* fix docker ci (#2227)

* sort ci action and create new Dockerfile for python

* add missing dockerfile

* remove env from docker ci action

* fix python dockerfile

* chore: apply tidy-public auto-fixes

* add action input to be able to build the python image

* add permissions

* read base input

* fix typo

* change default branch to master

* chore: apply tidy-public auto-fixes

* fix using wrong username on merge step

* change manual docker release to also build python

* fix digest name conflicts

* change choice to boolean for action input

* fix digest name using old variable

* sort versioning and add nightly action

* add permissions to nightly action

* add permissions to manual docker release action

* read dry-run from the docker action

* add dry_run to docker action

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>

* graphql bench on CI and vector bench (#2198)

* rewrite the vector bench script

* try disabling available memory setting

* try arroy append api

* add graphql benchmarks

* chore: apply tidy-public auto-fixes

* add parallel workflow for graphql bench

* chore: apply tidy-public auto-fixes

* setup python

* setup k6

* chore: apply tidy-public auto-fixes

* get output file out of the results folder

* add pnpm-workspace.yaml

* fix ci error

* chore: apply tidy-public auto-fixes

* fix ci for good this time?

* test gh pages branch

* chore: apply tidy-public auto-fixes

* test different dir for graphql

* reduce target

* add -100 for testing

* chore: apply tidy-public auto-fixes

* add TODO

* chore: apply tidy-public auto-fixes

* cleanup PR

* re-enable base benches

* fix flaky bench

* remove -100

* remove cell from results.ipynb

* sort parent workflow

* add missing bench.ts

* chore: apply tidy-public auto-fixes

* some final bits

* print json output on ci to make sure numbers are valid

* fix ci

* set iteration target to 6400

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>

* James/graphql docstrings (#2210)

* init

* docstrings

* docstrings for edges

* docstrings for edges

* regen schema and docs

* run formatting

* chore: apply tidy-public auto-fixes

* more docstrings

* backticks are not used by docs parser so remove

* more docstrings

* chore: apply tidy-public auto-fixes

* more docstrings

* chore: apply tidy-public auto-fixes

* more docstrings

* more docstrings

* update schema and format

* chore: apply tidy-public auto-fixes

* more docstrings

* chore: apply tidy-public auto-fixes

* more docstrings

* chore: apply tidy-public auto-fixes

* more docstrings

* chore: apply tidy-public auto-fixes

* more docstrings

* more docstrings

* cleanup

* more docstrings

* chore: apply tidy-public auto-fixes

* testcase for inputs

* cleanup

* chore: apply tidy-public auto-fixes

* more docstrings

* cleanup

* chore: apply tidy-public auto-fixes

* more docstrings

* cleanup

* chore: apply tidy-public auto-fixes

* fix page  docstrings

* cleanup

* remove latin

* chore: apply tidy-public auto-fixes

* initial fixes

* fmt

* chore: apply tidy-public auto-fixes

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
Co-authored-by: Ben Steer <[email protected]>

* Release v0.16.1 (#2236)

chore: Release

Co-authored-by: Pometry-Team <[email protected]>

* Fix explode layers for filtered persistent graph (#2241)

* explode layers for valid graph is broken

* explode_layers was ignoring layer filters for persistent semantics

* chore: apply tidy-public auto-fixes

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>

* James/graphql docstrings fixes (#2239)

* init

* docstrings

* docstrings for edges

* docstrings for edges

* regen schema and docs

* run formatting

* chore: apply tidy-public auto-fixes

* more docstrings

* backticks are not used by docs parser so remove

* more docstrings

* chore: apply tidy-public auto-fixes

* more docstrings

* chore: apply tidy-public auto-fixes

* more docstrings

* more docstrings

* update schema and format

* chore: apply tidy-public auto-fixes

* more docstrings

* chore: apply tidy-public auto-fixes

* more docstrings

* chore: apply tidy-public auto-fixes

* more docstrings

* chore: apply tidy-public auto-fixes

* more docstrings

* more docstrings

* cleanup

* more docstrings

* chore: apply tidy-public auto-fixes

* testcase for inputs

* cleanup

* chore: apply tidy-public auto-fixes

* more docstrings

* cleanup

* chore: apply tidy-public auto-fixes

* more docstrings

* cleanup

* chore: apply tidy-public auto-fixes

* fix page  docstrings

* cleanup

* remove latin

* chore: apply tidy-public auto-fixes

* initial fixes

* fmt

* chore: apply tidy-public auto-fixes

* fix double spacing

* review fixes

* specify layers for has_edge

* tidy

* chore: apply tidy-public auto-fixes

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
Co-authored-by: Ben Steer <[email protected]>
Co-authored-by: Ben Steer <[email protected]>

* James/graphql-userguide-16-x (#2233)

* update ui  image

* mutation and views

* persistent and event distinction

* clean up running steps and add cli

* subtitle

* proper hierarchy

* props and metadata examples

* Add troubleshooting

* add missing cli parameter

* chore: apply tidy-public auto-fixes

* add default save location to troubleshooting

* markdown formatting

* chore: apply tidy-public auto-fixes

* chore: apply tidy-public auto-fixes

* Clarify docker basics

* Clarify docker basics

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
Co-authored-by: Ben Steer <[email protected]>

* fix nightly release action (#2244)

* fix nightly release action

* fix versions missing

* chore: apply tidy-public auto-fixes

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>

* add docker retag action (#2245)

* add docker retag action

* add permissions

* chore: apply tidy-public auto-fixes

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>

* update Slack invite link (#2252)

* test strings in df loaders

* Increase sleep time on graphql bench (#2278)

Update Makefile

* remove polars from parquet and df loading

* Bump tracing-subscriber from 0.3.19 to 0.3.20 in the cargo group across 1 directory (#2251)

* Bump tracing-subscriber in the cargo group across 1 directory

Bumps the cargo group with 1 update in the / directory: [tracing-subscriber](https://github.com/tokio-rs/tracing).


Updates `tracing-subscriber` from 0.3.19 to 0.3.20
- [Release notes](https://github.com/tokio-rs/tracing/releases)
- [Commits](tokio-rs/tracing@tracing-subscriber-0.3.19...tracing-subscriber-0.3.20)

---
updated-dependencies:
- dependency-name: tracing-subscriber
  dependency-version: 0.3.20
  dependency-type: direct:production
  dependency-group: cargo
...

Signed-off-by: dependabot[bot] <[email protected]>

* chore: apply tidy-public auto-fixes

---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
Co-authored-by: Ben Steer <[email protected]>

* community detection (#2276)

Covers changes for ticket #2268 and adds an introduction to community detection with a tutorial using our existing algorithms and UI. This should apear first in the search results.

* initial introduction

* add karate example

* add karate example

* add assets and tests

* fix tests

* fix tests

* fix tests

* chore: apply tidy-public auto-fixes

* review: simplify node type assignment

* chore: apply tidy-public auto-fixes

* review: swap to csv file

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>

* Use raphtory from python dir (#2275)

* Use raphtory from python dir

* comment to match

* chore: apply tidy-public auto-fixes

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>

* add batch_size argument for the low-level functions

---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: wyatt-joyner-pometry <[email protected]>
Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
Co-authored-by: Pedro Rico Pinazo <[email protected]>
Co-authored-by: James Baross <[email protected]>
Co-authored-by: Ben Steer <[email protected]>
Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Ben Steer <[email protected]>
Co-authored-by: edsherrington <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>