Skip to content
View alexturcoo's full-sized avatar
9 followers · 15 following

Block or report alexturcoo

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don't include any personal information such as legal names or email addresses. Markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
alexturcoo/README.md

Welcome to my Github

🧬 Research Interests

Computational biology, cancer genomics, Next Generation Sequencing, long-read sequencing, repetitive DNA (non-B structures, tandem repeat expansions), dark genome (centromeres, telomeres), genome assembly and alignment, pangenomes, machine learning + AI for multi-omics, drug discovery

💻 Programming Languages:

Python R C++ Latex SQL

Pinned Loading

  1. ATACseq_TCGA_prediction ATACseq_TCGA_prediction Public

    Machine learning Cancer Type Classification for ATACseq cancer data from TCGA database.

    Jupyter Notebook

  2. DeepNucNet DeepNucNet Public

    Nuclei detection and segmentation deep learning project for graduate level AI course (Biomedical Applications of Artificial Intelligence)

    Python

  3. annota-bed annota-bed Public

    Fast and easy annotation of BED files for quick contextual genomic analysis

    TypeScript

  4. MBP1201H-Biostatistics MBP1201H-Biostatistics Public

    Final project for graduate level biostatistics course. Applying biostatistical methods to answer research hypotheses based on a heart disease dataset.

    Jupyter Notebook

  5. ont-nb-DNA ont-nb-DNA Public

    This repository is home to a variety of scripts and resources utilized for processing and analyzing Oxford Nanopore Sequencing Data to explore Non-B DNA Structures

    Jupyter Notebook

  6. SignalWeave SignalWeave Public

    A weakly supervised, interpreatable AML Risk Scoring Framework

    Jupyter Notebook