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Achievement: YOLOAchievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: Pull Sharkx2Achievement: Starstruck

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Achievement: YOLOAchievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: Pull Sharkx2Achievement: Starstruck

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byemaxx/README.md

Qing Wu (@byemaxx)

ORCID Google Scholar

Bioinformatics researcher in metaproteomics and multi-omics, developing peptide-centric methods and interactive tools for interpretable, reproducible analysis.

Keywords: metaproteomics · microbiome · peptide-centric inference · taxon–function linkage · visualization

GitHub Stats

Key Projects

🧬 MetaX — Operational Taxon-Function (OTF) framework

Peptide-centric framework linking peptide evidence to taxonomy and function for “who is doing what” analysis in metaproteomics.
Analytical Chemistry (2025). DOI: 10.1021/acs.analchem.4c06645
Repo · Docs

🌳 MetaTree — topology-consistent heat-tree comparison

Browser-based platform for aligned visualization and comparison of hierarchical profiles on a shared reference topology.
Repo · Web app

Other Projects

Bioinformatics: BlastGUI · SSREnricher · gseaGUI · SCFA_Marker · callCodeml
Android: PlayVersionSpoofer · FirstBusAutoNFC · TapAPDU

Tech Stack

  • Languages: Python · R · JavaScript · Kotlin · Java
  • Tooling: Linux · Docker · Git · Conda · Snakemake

Pinned Loading

  1. MetaX MetaX Public

    A novel tool for linking peptide with taxonomic and functional information with OTF in Metaproteomics.

    Python 5 1

  2. MetaTree MetaTree Public

    An Interactive heat-tree visualization toolkit for multi-sample and group comparisons

    JavaScript 1

  3. BlastGUI BlastGUI Public

    A Python-based Cross-platform Local Blast Visualization Software

    Python 8 1

  4. callCodeml callCodeml Public

    This is used to call Codeml to calculate the positive selection of gene in Branch-Sites Model.(Require codon sequence)

    Python 18 2

  5. BioTools BioTools Public

    Some bioinformatics tool scripts

    Python 10 2

  6. PlayVersionSpoofer PlayVersionSpoofer Public

    An Xposed module that prevents the Google Play Store from automatically updating itself.

    Kotlin 124 6