tag:github.com,2008:https://github.com/google/nucleus/releases 2021-08-25T01:52:52Z tag:github.com,2008:Repository/126868526/0.6.0 2021-08-31T23:19:33Z <ul> <li>Upgrade to support TensorFlow 2.6.0 specifically.</li> <li>Upgrade to Python 3.8.</li> </ul> <p>This release was tested on Ubuntu 20.04.</p> MariaNattestad tag:github.com,2008:Repository/126868526/0.5.9 2021-07-26T16:50:45Z <p>New in 0.5.9:</p> <ul> <li>Upgrade to support TensorFlow 2.5.0 specifically.</li> </ul> gunjanbaid tag:github.com,2008:Repository/126868526/0.5.8 2021-02-25T18:57:27Z <p>New in 0.5.8:</p> <ul> <li>Update <code>util/vis.py</code> to use updated channel names.</li> <li>Support <code>MED_DP</code> (median DP) field for a <code>VariantCall</code>.</li> </ul> gunjanbaid tag:github.com,2008:Repository/126868526/0.5.7 2021-01-15T17:27:02Z <p>New in 0.5.7:</p> <ul> <li>Add automatic pileup curation functionality in <code>util/vis.py</code>.</li> <li>Upgrade protobuf settings to support TensorFlow 2.4.0 specifically.</li> </ul> gunjanbaid tag:github.com,2008:Repository/126868526/0.5.6 2020-12-10T21:43:49Z <p>New in 0.5.6:</p> <ul> <li>Upgrade to protobuf 3.9.2 to support TensorFlow 2.3.0 specifically.</li> </ul> MariaNattestad tag:github.com,2008:Repository/126868526/0.5.5 2020-12-10T21:30:08Z <p>New in 0.5.5:</p> <ul> <li>Upgrade protobuf settings to support TensorFlow 2.2.0 specifically.</li> </ul> MariaNattestad tag:github.com,2008:Repository/126868526/0.5.4 2020-12-10T21:29:57Z <p>New in 0.5.4:</p> <ul> <li>Upgrade to protobuf 3.8.0 to support TensorFlow 2.1.0.</li> <li>Add explicit .close() method to TFRecordWriter.</li> </ul> MariaNattestad tag:github.com,2008:Repository/126868526/0.5.3 2020-09-09T01:45:51Z <p>New in 0.5.3:</p> <ul> <li>Fixes memory leaks in message_module.cc.</li> <li>Updates setup.py to install .egg-info directory for pip 20.2+ compatibility.</li> <li>Pins TensorFlow to 2.0.0 for protobuf version compatibility.</li> <li>Pins setuptools to 49.6.0 to avoid breaking changes of setuptools 50.</li> </ul> gunjanbaid tag:github.com,2008:Repository/126868526/0.5.2 2020-07-09T18:16:04Z <p>New in 0.5.2:</p> <ul> <li>Upgrades htslib dependency from 1.9 to 1.10.2.</li> <li>More informative error message for failed SAM header parsing.</li> <li><code>util/vis.py</code> now supports saving images to Google Cloud Storage.</li> </ul> gunjanbaid tag:github.com,2008:Repository/126868526/0.5.1 2020-04-29T21:59:57Z <p>New in 0.5.1:</p> <ul> <li>Updated documentation.</li> <li>Added list of read-advancing CIGAR ops.</li> <li>Added label_from_example utility in nucleus.util.vis.</li> <li>Added simplify_variant_alleles in nucleus.util.variant_utils.</li> </ul> gunjanbaid