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Remove bioformats2raw.layout in zarr attributes#2008

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petebankhead merged 1 commit intoqupath:mainfrom
Rylern:bioformats2raw.layout-issue
Oct 3, 2025
Merged

Remove bioformats2raw.layout in zarr attributes#2008
petebankhead merged 1 commit intoqupath:mainfrom
Rylern:bioformats2raw.layout-issue

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@Rylern
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@Rylern Rylern commented Oct 2, 2025

Zarr created with the Zarr writer didn't pass the ngff validator. This PR fixes that by removing the bioformats2raw.layout attribute.

See https://forum.image.sc/t/qupath-zarr-export-using-bioformats2raw-layout-issue/116808 for more details.

@will-moore
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Changes look good (not tested).

@petebankhead petebankhead added this to the v0.7.0 milestone Oct 3, 2025
@petebankhead petebankhead merged commit 61ba0a0 into qupath:main Oct 3, 2025
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@Rylern Rylern deleted the bioformats2raw.layout-issue branch October 3, 2025 14:59
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3 participants