Bioinformatics Stack Exchange

3 votes

2 answers

1k views

Finding common and unique data set by comparing two files based on their column and to split the columns multiple strings to print in output

CommunityBot

1

modified 17 hours ago

0 votes

1 answer

80 views

What is the cross sectional area of DNA? Can we find persistence length using oxDNA?

CommunityBot

1

modified Apr 21 at 0:01

0 votes

1 answer

101 views

How evaluate biclustering algorithm over real datasets containing labels?

CommunityBot

1

modified Apr 20 at 19:03

2 votes

0 answers

6 views

How to visualize interactions between protein and ligand in an MD trajectory

terdon♦

11.5k

modified Apr 20 at 11:23

2 votes

0 answers

137 views

How to perform variant effect prediction/significance on variants called from scRNA-seq?

M__♦

13.4k

modified Apr 20 at 2:36

2 votes

1 answer

53 views

What minimal checks do you run on FASTA files before starting a long bioinformatics pipeline?

CommunityBot

1

modified Apr 15 at 17:00

1 vote

0 answers

9 views

Best practices for validating GO/KEGG enrichment and identifying hub genes from ClinVar-derived gene sets?

Geethu Suresh

11

asked Apr 15 at 15:07

2 votes

1 answer

319 views

Merging ssu-align alignments

CommunityBot

1

modified Apr 14 at 1:09

1 vote

0 answers

10 views

OpenMM users, how do you analyze hydrogen bonds?

hwa-le

41

asked Apr 13 at 12:55

0 votes

2 answers

135 views

Is outlier detection the right choice for determining if a value lies significantly away from the mean in a population in gene frequency?

Stephen Henderson

121

answered Apr 13 at 11:42

0 votes

0 answers

7 views

Adding classifier to pretrained protein seqeunce model

biotech_ml

1

asked Apr 13 at 10:27

2 votes

1 answer

221 views

Problem with classification model of genomic data: every machine learing model predicts wrongly almost always the same subset of dataset

CommunityBot

1

modified Apr 11 at 19:05

1 vote

1 answer

76 views

affy::rma results doesn't match with ncbi website

CommunityBot

1

modified Apr 10 at 12:00

0 votes

2 answers

235 views

How long should it take to cluster Uniref?

CommunityBot

1

modified Apr 9 at 16:05

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Finding common and unique data set by comparing two files based on their column and to split the columns multiple strings to print in output

What is the cross sectional area of DNA? Can we find persistence length using oxDNA?

How evaluate biclustering algorithm over real datasets containing labels?

How to visualize interactions between protein and ligand in an MD trajectory

How to perform variant effect prediction/significance on variants called from scRNA-seq?

What minimal checks do you run on FASTA files before starting a long bioinformatics pipeline?

Best practices for validating GO/KEGG enrichment and identifying hub genes from ClinVar-derived gene sets?

Merging ssu-align alignments

OpenMM users, how do you analyze hydrogen bonds?

Is outlier detection the right choice for determining if a value lies significantly away from the mean in a population in gene frequency?

Adding classifier to pretrained protein seqeunce model

Problem with classification model of genomic data: every machine learing model predicts wrongly almost always the same subset of dataset

affy::rma results doesn't match with ncbi website

How long should it take to cluster Uniref?

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