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Commits on Mar 5, 2016

• Refactored CollectWgsMetrics and added CollectWgsMetricsWithNonZeroCoverage.

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Commits on Dec 1, 2015

• The minimum percentage for a paired orientation should be greater than

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Commits on Nov 10, 2015

• updating the colors of the cumulative lines in the insert size plots;

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• adding cumulative plot to insert size

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Commits on Nov 4, 2015

• produce a plot when we have multiple orientations for all reads and

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Commits on Aug 26, 2015

• update path

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Commits on Jul 20, 2015

• Provided a helper script for passing JVM args to docker.

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Commits on Jun 9, 2015

• Working on changing CollectGcBiasMetrics to work as a MultiLevelCollector

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Commits on Oct 22, 2014

• This makes a fundamental change to how we run Picard. We now have a

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Commits on Jul 29, 2014

• Added a new tool, CollectBaseDistributionByCycle, that computes the

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  authored and

  Nils Homer

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Commits on May 3, 2014

• Step 1: initial move of files for split and refactor to produce picard

  

  Nils Homer

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