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Commits on Jun 7, 2016

• sprucing-up ScatterIntervalsByNsTest (#543)

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  Yossi Farjoun

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Commits on Feb 18, 2016

• squid:S1170 - Public constants and fields initialized at declaration should be "static final" rather than merely "final"

  

  Mohammed Ezzat

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Commits on Jan 21, 2016

• Simple CLP for safely converting from IntervalList to BED.

  tfenne

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Commits on Jan 11, 2016

• Change BedToIntervalList to be non-destructive by default.

  tfenne

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Commits on Oct 19, 2015

• Deleting temporary files and directories in tests

  yfarjoun

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Commits on Aug 31, 2015

• refactoring out common code from CollectWgsMetricsFromQuerySorted for testing and reuse

  kcibul

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Commits on Aug 5, 2015

• added a utility function to get the log of a list of doubles.

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  Yossi Farjoun

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Commits on Jul 23, 2015

• Merge pull request #240 from broadinstitute/nh_nenewell_master

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  nh13

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• fixing bed to interval test by not catching an Exception

  

  Nils Homer

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• Modify BedToIntervalList to accept other dictionary files

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  abaumann

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Commits on Oct 22, 2014

• This makes a fundamental change to how we run Picard. We now have a

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  nh13

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Commits on Sep 4, 2014

• BUGFIX: BedToIntervalList would not accept an input BED interval was one base long

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  nh13

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  Nils Homer

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Commits on Sep 3, 2014

• adding the ability to add the full five fields when creating an interval

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  Nils Homer

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• adding a tool to convert BED files to Picard Interval Lists.

  

  Nils Homer

  committed
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Commits on Aug 22, 2014

• First version of a large-memory fifo buffer class.

  

  Tim Fennell

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Commits on Jul 11, 2014

• Added a divide function to Math.Utils

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  Yossi Farjoun

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Commits on May 15, 2014

• Add new modes to `IntervalListTools`.

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  mccowan

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Commits on May 3, 2014

• Step 3: Optimizing imports

  

  Nils Homer

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• Step 2: refactor files for the split and refactor to produce picard

  

  Nils Homer

  committed
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• Step 1: initial move of files for split and refactor to produce picard

  

  Nils Homer

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