A comprehensive collection of repositories for behavioral analysis, neuroimaging, motion tracking, and brain-behavior quantification research.
| Repository | Version | Language | Stars | Description | GitHub Link |
|---|---|---|---|---|---|
| SimBA | v1.90.0 | Python | 175 | Simple Behavioral Analysis - Pipeline and GUI for developing supervised behavioral classifiers | sgoldenlab/simba |
| brain-bbqs.github.io | v2.0.0 | HTML | 7 | Official website for Brain Behavior Quantification and Synchronization | brain-bbqs/brain-bbqs.github.io |
| DeepLabCut | v3.0.0 | Python | 1.8k | Official implementation of DeepLabCut: Markerless pose estimation with deep learning | DeepLabCut/DeepLabCut |
| Hannah | v0.5.0 | TypeScript | 0 | BBQS conversational assistant and data management interface | sgoldenlab/Hannah |
| Neurobehavior-Taxonomy-Statuses | v1.2.0 | Markdown | 1k | GitHub Actions system for ontology and taxonomy monitoring designed for Hannah | sgoldenlab/Neurobehavior-Taxonomy-Statuses |
| LabStreamingLayer | v1.16.2 | HTML | 179 | LSL super repository comprising submodules for LSL and associated apps | sccn/labstreaminglayer |
| bbqs-kg | v0.9.0 | TypeScript | 1 | Code for constructing knowledge graphs from BBQS Bot data | sgoldenlab/bbqs-kg |
| bbqs_model_zoo | v0.3.0 | CSS | 0 | Model Zoo for BBQS Projects - pretrained models and benchmarks | sgoldenlab/bbqs_model_zoo |
| OpenFace | v2.2.0 | MATLAB | 1.9k | Facial landmark detection, head pose estimation, facial action unit recognition, and eye-gaze estimation | TadasBaltrusaitis/OpenFace |
| MARS | v1.4.0 | Python | 14 | Mouse Action Recognition System - End-user version for automated behavior classification | sgoldenlab/MARS |
| TREBA | v1.0.0 | Python | - | Learning trajectory representations using self-supervision and programmatic supervision | sgoldenlab/TREBA |
Last Updated: November 2024