Cell Annotation Platform
Tooling for the Cell Annotation Platform
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- cap-data-schema Public
Data schema of the AnnData (*.h5ad) file for ingestion to the Cell-Annotation-Platform (CAP)
cellannotation/cap-data-schema’s past year of commit activity - cap-validator Public
Python tool for validating H5AD AnnData files before uploading to the Cell Annotation Platform.
cellannotation/cap-validator’s past year of commit activity - cap-pipeline-config Public
Building ontology pipeline configurations for the Cell Annotation Platform
cellannotation/cap-pipeline-config’s past year of commit activity - cap_ontology Public
An ODK based repo that allows us to finely tailor content for loading into the KB and also to manage content generated for CAP
cellannotation/cap_ontology’s past year of commit activity - cap-gene-filtering Public
Genes which are often over-expressed but biologically non-informative, filtered out on CAP by default
cellannotation/cap-gene-filtering’s past year of commit activity
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