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@cytoscape

Cytoscape Consortium

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  1. cytoscape cytoscape Public

    Cytoscape: an open source platform for network analysis and visualization

    Shell 690 149

  2. cytoscape-web cytoscape-web Public

    A browser-based implementation of Cytoscape for network visualization and analysis. Runs entirely in your browser with data-driven styling, collaborative workflows, and Cytoscape ecosystem integrat…

    TypeScript 28 16

  3. cytoscape.js cytoscape.js Public

    Graph theory (network) library for visualisation and analysis

    JavaScript 10.9k 1.7k

  4. cytoscape-api cytoscape-api Public

    Cytoscape 3 API bundles.

    Java 26 34

  5. cyREST cyREST Public

    Core App: REST API module for Cytoscape

    JavaScript 31 12

  6. cytoscape-impl cytoscape-impl Public

    Cytoscape 3 implementation bundles.

    Java 41 40

Repositories

Showing 10 of 164 repositories
  • cytoscape-web Public

    A browser-based implementation of Cytoscape for network visualization and analysis. Runs entirely in your browser with data-driven styling, collaborative workflows, and Cytoscape ecosystem integration.

    cytoscape/cytoscape-web’s past year of commit activity
    TypeScript 28 MIT 16 1 7 Updated Mar 20, 2026
  • cytoscape-desktop-mcp Public

    App which provides an MCP server for integration of desktop with agents

    cytoscape/cytoscape-desktop-mcp’s past year of commit activity
    Java 3 BSD-3-Clause 0 0 0 Updated Mar 20, 2026
  • cytoscape.js-compound-drag-and-drop Public

    Compound node drag-and-drop UI for adding and removing children

    cytoscape/cytoscape.js-compound-drag-and-drop’s past year of commit activity
    JavaScript 33 MIT 15 0 5 Updated Mar 20, 2026
  • cytoscape.js-dagre Public

    The Dagre layout for DAGs and trees for Cytoscape.js

    cytoscape/cytoscape.js-dagre’s past year of commit activity
    JavaScript 277 MIT 79 1 5 Updated Mar 20, 2026
  • cytoscape.github.com Public

    Cytoscape org web site.

    cytoscape/cytoscape.github.com’s past year of commit activity
    HTML 22 14 1 0 Updated Mar 19, 2026
  • cytoscape-web-app-examples Public

    (Experimental) Example apps for Cytoscape Web

    cytoscape/cytoscape-web-app-examples’s past year of commit activity
    TypeScript 4 MIT 0 0 0 Updated Mar 19, 2026
  • cytoscape.js Public

    Graph theory (network) library for visualisation and analysis

    cytoscape/cytoscape.js’s past year of commit activity
    JavaScript 10,907 MIT 1,664 17 6 Updated Mar 18, 2026
  • cytoscape.js-cxtmenu Public

    Context menu for Cytoscape.js

    cytoscape/cytoscape.js-cxtmenu’s past year of commit activity
    JavaScript 179 MIT 79 0 4 Updated Mar 17, 2026
  • network-ptm-integration Public

    This repo tracks the work of data-driven addition of phosphorylation sites to proteins in networks (and pathways).

    cytoscape/network-ptm-integration’s past year of commit activity
    R 0 MIT 0 7 0 Updated Mar 16, 2026
  • cytoscape.js-panzoom Public

    Panzoom extension for Cytoscape.js

    cytoscape/cytoscape.js-panzoom’s past year of commit activity
    CSS 68 MIT 31 0 5 Updated Mar 14, 2026
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