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Easyblocks for R extenison patching (including extract) and Extesnion Rm...#435

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boegel merged 5 commits intoeasybuilders:developfrom
hajgato:easyblocks_for_contrib_R-3.1.0-intel-2014b
Sep 10, 2014
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Easyblocks for R extenison patching (including extract) and Extesnion Rm...#435
boegel merged 5 commits intoeasybuilders:developfrom
hajgato:easyblocks_for_contrib_R-3.1.0-intel-2014b

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@hajgato hajgato commented Jul 8, 2014

...pi Intel MPI support (if version >= 0.6-4)

… Rmpi Intel MPI support (if version >= 0.6-4)
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Automatic reply from Jenkins: Can I test this?

@wpoely86
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ok to test

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the cmd value is exactly the same in both cases?!

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Look at more close!
cmd = "R CMD INSTALL %s %s %s %s --no-clean-on-error" % (self.ext_dir, confargs, confvars, prefix)
and
cmd = "R CMD INSTALL %s %s %s %s --no-clean-on-error" % (self.ext_src, confargs, confvars, prefix)

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Maybe split up the command and the tuple then? The cmd string itself is the same?

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Yeah, exactly. Suggestion:

if self.patches:
    loc = self.ext_dir
else:
    loc = self.ext_src
cmd = "R CMD INSTALL %s %s %s %s --no-clean-on-error" % (loc, confargs, confvars, prefix)

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hajgato commented Aug 1, 2014

Updated with comments.

Comment thread easybuild/easyblocks/r/rmpi.py Outdated
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should say "MPICH and Intel MPI"

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hajgato commented Aug 4, 2014

Typos and style corrected

Balázs Hajgató added 2 commits September 10, 2014 09:43
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boegel commented Sep 10, 2014

Tested with easybuilders/easybuild-easyconfigs#1077, working great, so going in. Thanks @hajgato!

boegel added a commit that referenced this pull request Sep 10, 2014
…ntel-2014b

Easyblocks for R extenison patching (including extract) and Extesnion Rm...
@boegel boegel merged commit 40fb734 into easybuilders:develop Sep 10, 2014
@hajgato hajgato deleted the easyblocks_for_contrib_R-3.1.0-intel-2014b branch October 16, 2014 08:53
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4 participants