Skip to content

{bio}[foss/2020b] RegTools v0.5.2 w/ Python 3.8.6#12874

Merged
branfosj merged 2 commits intoeasybuilders:developfrom
boegel:20210517150619_new_pr_RegTools052
May 18, 2021
Merged

{bio}[foss/2020b] RegTools v0.5.2 w/ Python 3.8.6#12874
branfosj merged 2 commits intoeasybuilders:developfrom
boegel:20210517150619_new_pr_RegTools052

Conversation

@boegel
Copy link
Copy Markdown
Member

@boegel boegel commented May 17, 2021

(created using eb --new-pr)

@boegel boegel added the new label May 17, 2021
@branfosj
Copy link
Copy Markdown
Member

branfosj commented May 17, 2021

@boegelbot please test @ generoso

@branfosj branfosj added this to the 4.x milestone May 17, 2021
@boegelbot
Copy link
Copy Markdown
Collaborator

boegelbot commented May 17, 2021

@branfosj: Request for testing this PR well received on generoso

PR test command 'EB_PR=12874 EB_ARGS= /apps/slurm/default/bin/sbatch --job-name test_PR_12874 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 17235

Test results coming soon (I hope)...

Details

- notification for comment with ID 842518633 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

@branfosj
Copy link
Copy Markdown
Member

branfosj commented May 17, 2021

Test report by @branfosj
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
bear-pg0211u03a.bear.cluster - Linux RHEL 8.3, x86_64, Intel(R) Xeon(R) Gold 6248 CPU @ 2.50GHz (cascadelake), Python 3.6.8
See https://gist.github.com/a121b06ac35d16c6706354338662ba73 for a full test report.

@boegelbot
Copy link
Copy Markdown
Collaborator

boegelbot commented May 17, 2021

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
generoso-c1-s-1 - Linux centos linux 8.2.2004, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/85c6734637e9dad687f5eb46b4b17594 for a full test report.

branfosj
branfosj requested changes May 17, 2021
View reviewed changes
Copy link
Copy Markdown
Member

@branfosj branfosj left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

The create_IGVsessions.py script has import yaml. If this is being used then PyYaml should be added as a dependency.

The other Python imports and R libraries look to be available.

@boegel
Copy link
Copy Markdown
Member Author

boegel commented May 18, 2021

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node2618.swalot.os - Linux centos linux 7.9.2009, x86_64, Intel(R) Xeon(R) CPU E5-2660 v3 @ 2.60GHz (haswell), Python 3.6.8
See https://gist.github.com/960aff01863909a6d2699cdbf5702905 for a full test report.

@branfosj
Copy link
Copy Markdown
Member

branfosj commented May 18, 2021

Test report by @branfosj
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
bear-pg0211u08b.bear.cluster - Linux RHEL 8.3, x86_64, Intel(R) Xeon(R) Gold 6248 CPU @ 2.50GHz (cascadelake), Python 3.6.8
See https://gist.github.com/81ba7cb857965a4f9457617273e237ab for a full test report.

@branfosj branfosj modified the milestones: 4.x, next release (4.4.0) May 18, 2021
@branfosj
Copy link
Copy Markdown
Member

branfosj commented May 18, 2021

Going in, thanks @boegel!

@branfosj branfosj merged commit e151ddd into easybuilders:develop May 18, 2021
@boegel boegel deleted the 20210517150619_new_pr_RegTools052 branch May 18, 2021 08:54
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

@branfosj branfosj branfosj approved these changes

Assignees

No one assigned

Labels

new

Projects

None yet

Milestone

4.4.0

Development

Successfully merging this pull request may close these issues.

3 participants

@boegel @branfosj @boegelbot