{bio} [dummy] MuTect-1.1.4-Java-1.7.0_76 (REVIEW) by pescobar · Pull Request #1483 · easybuilders/easybuild-easyconfigs

pescobar · 2015-03-15T21:03:22Z

No description provided.

hpcugentbot · 2015-03-15T21:08:10Z

Refer to this link for build results (access rights to CI server needed):
https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/2589/
Test PASSed.

rjeschmi · 2015-03-16T01:58:31Z

Test report by @rjeschmi
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
Linux centos 6.6, Intel(R) Xeon(R) CPU E5440 @ 2.83GHz, Python 2.6.6
See https://gist.github.com/86f75990071c3d368a7c for a full test report.

rjeschmi · 2015-03-16T01:59:15Z

Test report by @rjeschmi
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
Linux centos 6.6, Intel(R) Xeon(R) CPU E5440 @ 2.83GHz, Python 2.6.6
See https://gist.github.com/f05cde3df4d63502a772 for a full test report.

rjeschmi · 2015-03-16T02:00:51Z

Test report by @rjeschmi
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
Linux centos 6.6, Intel(R) Xeon(R) CPU E5440 @ 2.83GHz, Python 2.6.6
See https://gist.github.com/6577fa26983a086a3dcf for a full test report.

boegel · 2015-05-31T13:26:25Z

Jenkins: test this please

boegel · 2015-05-31T13:32:19Z

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
Linux SL 6.6, Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz, Python 2.6.6
See https://gist.github.com/56a2e4f2633124dfa5b8 for a full test report.

hpcugentbot · 2015-05-31T13:40:34Z

Refer to this link for build results (access rights to CI server needed):
https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/3172/
Easyconfigs unit test suite PASSed (see https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/3172/console for more details).

This pull request is now ready for review/testing.

Please try and find someone who can tackle this; contact @boegel if you're not sure what to do.

boegel · 2015-05-31T18:35:57Z

@pescobar: please fix the directory name: MuTect vs muTect

boegel · 2015-06-03T07:58:40Z

Test report by @boegel
FAILED
Build succeeded for 0 out of 1 (1 easyconfigs in this PR)
Linux SL 6.6, Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz, Python 2.6.6
See https://gist.github.com/85b73d9a6437e0f92f70 for a full test report.

boegel · 2015-06-03T08:00:30Z

@pescobar: ERROR Sanity check failed: no file of ('MuTect-1.1.4.jar',) in ...

hpcugentbot · 2015-06-03T08:00:31Z

Refer to this link for build results (access rights to CI server needed):
https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/3235/
Easyconfigs unit test suite PASSed (see https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/3235/console for more details).

This pull request is now ready for review/testing.

Please try and find someone who can tackle this; contact @boegel if you're not sure what to do.

fgeorgatos · 2015-06-03T13:37:25Z

I would have really liked it to standardize in the bio world upon 1.7.0_80, but I leave that up to you...
this looks good overall, fingers crossed it works for others.

Well, it does have the versionsuffix... the 1.7.0_80 version is only a PR away ;)

boegel · 2015-06-03T13:37:42Z

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
Linux SL 6.6, Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz, Python 2.6.6
See https://gist.github.com/6898637d45d13b72ad3a for a full test report.

hpcugentbot · 2015-06-03T13:41:05Z

Refer to this link for build results (access rights to CI server needed):
https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/3312/
Easyconfigs unit test suite PASSed (see https://jenkins1.ugent.be/job/easybuild-easyconfigs-pr-builder/3312/console for more details).

This pull request is now ready for review/testing.

Please try and find someone who can tackle this; contact @boegel if you're not sure what to do.

boegel · 2015-06-03T13:41:54Z

Going in, thanks @pescobar!

{bio} [dummy] MuTect-1.1.4-Java-1.7.0_76 (REVIEW)

fgeorgatos · 2015-06-03T15:29:48Z

deps are involved, so version must be empty

also: this is merged already :)

mutect easyconfig

1c8dd2e

renamed to MuTect and updated download url

b684e59

fixed sanity check and message on load

cad86d3

fgeorgatos reviewed Jun 3, 2015
View reviewed changes

boegel added a commit that referenced this pull request Jun 3, 2015

Merge pull request #1483 from pescobar/MuTect

892755a

{bio} [dummy] MuTect-1.1.4-Java-1.7.0_76 (REVIEW)

boegel merged commit 892755a into easybuilders:develop Jun 3, 2015

fgeorgatos reviewed Jun 3, 2015
View reviewed changes

Conversation

pescobar commented Mar 15, 2015

Uh oh!

hpcugentbot commented Mar 15, 2015

Uh oh!

rjeschmi commented Mar 16, 2015

Uh oh!

rjeschmi commented Mar 16, 2015

Uh oh!

rjeschmi commented Mar 16, 2015

Uh oh!

boegel commented May 31, 2015

Uh oh!

boegel commented May 31, 2015

Uh oh!

hpcugentbot commented May 31, 2015

Uh oh!

boegel commented May 31, 2015

Uh oh!

boegel commented Jun 3, 2015

Uh oh!

boegel commented Jun 3, 2015

Uh oh!

hpcugentbot commented Jun 3, 2015

Uh oh!

fgeorgatos Jun 3, 2015

Choose a reason for hiding this comment

Uh oh!

boegel Jun 3, 2015

Choose a reason for hiding this comment

Uh oh!

boegel commented Jun 3, 2015

Uh oh!

hpcugentbot commented Jun 3, 2015

Uh oh!

boegel commented Jun 3, 2015

Uh oh!

fgeorgatos Jun 3, 2015

Choose a reason for hiding this comment

Uh oh!

boegel Jun 3, 2015

Choose a reason for hiding this comment

Uh oh!

Reviewers

Assignees

Labels

Projects

Milestone

Development

Uh oh!

5 participants