Skip to content

add missing dependencies + switch to non-static build for Arriba v2.1.0#15623

Merged
SebastianAchilles merged 1 commit intoeasybuilders:developfrom
boegel:20220606103053_new_pr_Arriba210
Jun 6, 2022
Merged

add missing dependencies + switch to non-static build for Arriba v2.1.0#15623
SebastianAchilles merged 1 commit intoeasybuilders:developfrom
boegel:20220606103053_new_pr_Arriba210

Conversation

@boegel
Copy link
Copy Markdown
Member

@boegel boegel commented Jun 6, 2022 •
edited
Loading

(created using eb --new-pr)
Default static build involves downloading source tarballs for various dependencies, including zlib v1.2.11 which fails miserably:

/usr/bin/wget  -O - 'https://zlib.net/zlib-1.2.11.tar.gz' | tar -xzf - -C libraries && \
cd libraries/zlib-*/ && ./configure && make libz.a && cp zlib.h zconf.h libz.a ..
--2022-06-06 10:24:06--  https://zlib.net/zlib-1.2.11.tar.gz
Resolving zlib.net (zlib.net)... 85.187.148.2
Connecting to zlib.net (zlib.net)|85.187.148.2|:443... connected.
HTTP request sent, awaiting response... 404 Not Found
2022-06-06 10:24:07 ERROR 404: Not Found.


gzip: stdin: unexpected end of file

@boegel boegel added the bug fix label Jun 6, 2022
@boegel boegel added this to the release after 4.5.5 milestone Jun 6, 2022
@boegel
Copy link
Copy Markdown
Member Author

boegel commented Jun 6, 2022

@boegelbot please test @ generoso

@boegelbot
Copy link
Copy Markdown
Collaborator

boegelbot commented Jun 6, 2022

@boegel: Request for testing this PR well received on login1

PR test command 'EB_PR=15623 EB_ARGS= /opt/software/slurm/bin/sbatch --job-name test_PR_15623 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 8665

Test results coming soon (I hope)...

Details

- notification for comment with ID 1147190493 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

@boegelbot
Copy link
Copy Markdown
Collaborator

boegelbot commented Jun 6, 2022

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/8c90148325a29fb5020ca2d44651d47f for a full test report.

@boegel
Copy link
Copy Markdown
Member Author

boegel commented Jun 6, 2022

Test report by @boegel
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node3108.skitty.os - Linux RHEL 8.4, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/98fef2072b2a1b1464656e0bb3049b84 for a full test report.

@SebastianAchilles
Copy link
Copy Markdown
Member

SebastianAchilles commented Jun 6, 2022

@boegelbot please test @ jsc-zen2

@boegelbot
Copy link
Copy Markdown
Collaborator

boegelbot commented Jun 6, 2022

@SebastianAchilles: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=15623 EB_ARGS= /opt/software/slurm/bin/sbatch --job-name test_PR_15623 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 1261

Test results coming soon (I hope)...

Details

- notification for comment with ID 1147249240 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

@SebastianAchilles
Copy link
Copy Markdown
Member

SebastianAchilles commented Jun 6, 2022

Test report by @SebastianAchilles
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
skylake-alma8-eb - Linux AlmaLinux 8.5, x86_64, Intel(R) Core(TM) i7-8700 CPU @ 3.20GHz (skylake), Python 3.6.8
See https://gist.github.com/fdeb5b9ef6c96ab97b235ca24a531777 for a full test report.

SebastianAchilles
SebastianAchilles approved these changes Jun 6, 2022
View reviewed changes
Copy link
Copy Markdown
Member

@SebastianAchilles SebastianAchilles left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

lgtm

@boegelbot
Copy link
Copy Markdown
Collaborator

boegelbot commented Jun 6, 2022

Test report by @boegelbot
SUCCESS
Build succeeded for 7 out of 7 (2 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/1a287aedbd7ed6698c5c5348c1e5a8cd for a full test report.

@SebastianAchilles
Copy link
Copy Markdown
Member

SebastianAchilles commented Jun 6, 2022

Going in, thanks @boegel!

@SebastianAchilles SebastianAchilles merged commit 04b089b into easybuilders:develop Jun 6, 2022
@jfgrimm
Copy link
Copy Markdown
Member

jfgrimm commented Jun 6, 2022

Test report by @jfgrimm
SUCCESS
Build succeeded for 5 out of 5 (2 easyconfigs in total)
himem06.pri.viking.alces.network - Linux CentOS Linux 7.9.2009, x86_64, Intel(R) Xeon(R) Platinum 8160 CPU @ 2.10GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/55a30dfb0094edf292843ee0c732bcad for a full test report.

@boegel boegel deleted the 20220606103053_new_pr_Arriba210 branch June 6, 2022 10:10
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

@SebastianAchilles SebastianAchilles SebastianAchilles approved these changes

Assignees

No one assigned

Labels

bug fix

Projects

None yet

Milestone

4.5.5

Development

Successfully merging this pull request may close these issues.

4 participants

@boegel @boegelbot @SebastianAchilles @jfgrimm