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ThomasHoffmann77
changed the title
patch for fixing jax0.3.9 nan problem
{bio}[foss/2021a] AlphaFold v2.2.2 patch for fixing jax0.3.9 nan problem
Jul 19, 2022
Test report by @jfgrimm SUCCESS
Build succeeded for 3 out of 3 (2 easyconfigs in total)
gpu02.pri.viking.alces.network - Linux CentOS Linux 7.9.2009, x86_64, Intel(R) Xeon(R) Gold 6138 CPU @ 2.00GHz (skylake_avx512), 1 x NVIDIA Tesla V100-SXM2-32GB, 510.47.03, Python 3.6.8
See https://gist.github.com/b5f5bf7acd938ae761adcf5f67708911 for a full test report.
boegel
changed the title
{bio}[foss/2021a] AlphaFold v2.2.2 patch for fixing jax0.3.9 nan problem
add patch for AlphaFold v2.2.2 to fix NaN problem with jax 0.3.9
Aug 3, 2022
Test report by @boegel SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node3307.joltik.os - Linux RHEL 8.4, x86_64, Intel(R) Xeon(R) Gold 6242 CPU @ 2.80GHz (cascadelake), 1 x NVIDIA Tesla V100-SXM2-32GB, 510.73.08, Python 3.6.8
See https://gist.github.com/0c9644652b6d998d242151332723590d for a full test report.
Test report by @boegel SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node3904.accelgor.os - Linux RHEL 8.4, x86_64, AMD EPYC 7413 24-Core Processor (zen3), 1 x NVIDIA NVIDIA A100-SXM4-80GB, 510.73.08, Python 3.6.8
See https://gist.github.com/116e89b284db226dd37e201d7837d91f for a full test report.
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eb --new-pr)edit (by @boegel): patch based on google-deepmind/alphafold#513