Skip to content

add patch to fix installation of MetaBAT 2.15 on non-x86_64 systems#16633

Merged
lexming merged 1 commit intoeasybuilders:developfrom
boegel:20221113175343_new_pr_MetaBAT215
Nov 16, 2022
Merged

add patch to fix installation of MetaBAT 2.15 on non-x86_64 systems#16633
lexming merged 1 commit intoeasybuilders:developfrom
boegel:20221113175343_new_pr_MetaBAT215

Conversation

@boegel
Copy link
Copy Markdown
Member

@boegel boegel commented Nov 13, 2022

(created using eb --new-pr)

@boegel
Copy link
Copy Markdown
Member Author

boegel commented Nov 13, 2022

@boegelbot please test @ generoso

@boegel
Copy link
Copy Markdown
Member Author

boegel commented Nov 13, 2022

Test report by @boegel
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
node3139.skitty.os - Linux RHEL 8.4, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/2f3781237e5970a43078550ef35c43d3 for a full test report.

@boegelbot
Copy link
Copy Markdown
Collaborator

@boegel: Request for testing this PR well received on login1

PR test command 'EB_PR=16633 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_16633 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 9513

Test results coming soon (I hope)...

Details

- notification for comment with ID 1312806538 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

@boegelbot
Copy link
Copy Markdown
Collaborator

Test report by @boegelbot
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/18f3641f65cc7e0f9fb776734dd06835 for a full test report.

@boegel
Copy link
Copy Markdown
Member Author

boegel commented Nov 13, 2022

Test report by @boegel
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
easybuild2.novalocal - Linux CentOS Stream 8, POWER, IBM pSeries (emulated by qemu) (power9le), Python 3.6.8
See https://gist.github.com/9b1ee20b7460bdde39a52a39d2238def for a full test report.

@boegel
Copy link
Copy Markdown
Member Author

boegel commented Nov 13, 2022

Test report by @boegel
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
fair-mastodon-c6g-2xlarge-0001 - Linux Rocky Linux 8.5, AArch64, ARM UNKNOWN (graviton2), Python 3.6.8
See https://gist.github.com/6bf17f1cdb27505cdabde2fadf061839 for a full test report.

@boegel boegel changed the title add patch to fix installation of MetaBAT 2.15 on aarch64 add patch to fix installation of MetaBAT 2.15 on non-x86_64 systems Nov 13, 2022
@smoretti smoretti added the BioHack2022 Related to EU BioHackathon 2022 label Nov 14, 2022
@boegel boegel requested a review from lexming November 15, 2022 18:47
Copy link
Copy Markdown
Contributor

@lexming lexming left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM

@lexming
Copy link
Copy Markdown
Contributor

lexming commented Nov 16, 2022

Going in, thanks @boegel !

@lexming lexming merged commit 75b1b16 into easybuilders:develop Nov 16, 2022
@boegel boegel deleted the 20221113175343_new_pr_MetaBAT215 branch November 16, 2022 14:25
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

BioHack2022 Related to EU BioHackathon 2022 bug fix EESSI Related to EESSI project

Projects

None yet

Development

Successfully merging this pull request may close these issues.

4 participants