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Add ReactomePA extension and deps to R-bundle-Bioconductor/3.15#17315

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branfosj merged 1 commit intoeasybuilders:developfrom
verdurin:20230213224423_new_pr_R-bundle-Bioconductor315
Feb 14, 2023
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Add ReactomePA extension and deps to R-bundle-Bioconductor/3.15#17315
branfosj merged 1 commit intoeasybuilders:developfrom
verdurin:20230213224423_new_pr_R-bundle-Bioconductor315

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@verdurin verdurin commented Feb 13, 2023

(created using eb --new-pr)

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branfosj commented Feb 14, 2023

@boegelbot please test @ generoso
EB_ARGS="--skip"

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boegelbot commented Feb 14, 2023

@branfosj: Request for testing this PR well received on login1

PR test command 'EB_PR=17315 EB_ARGS="--skip" EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17315 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 10227

Test results coming soon (I hope)...

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- notification for comment with ID 1429550396 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegelbot commented Feb 14, 2023

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/28148a69df8e89d027c067a130a123af for a full test report.

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branfosj commented Feb 14, 2023

@boegelbot please test @ jsc-zen2
EB_ARGS="--skip"

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boegelbot commented Feb 14, 2023

@branfosj: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=17315 EB_ARGS="--skip" /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_17315 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 2191

Test results coming soon (I hope)...

Details

- notification for comment with ID 1429568034 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegelbot commented Feb 14, 2023

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/4db29812d5c8ff8955431b439e70cb7b for a full test report.

@branfosj branfosj added this to the next release (4.7.1?) milestone Feb 14, 2023
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branfosj commented Feb 14, 2023

Test report by @branfosj
SUCCESS
Build succeeded for 3 out of 3 (1 easyconfigs in total)
bear-pg0105u03a.bear.cluster - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Platinum 8360Y CPU @ 2.40GHz (icelake), Python 3.6.8
See https://gist.github.com/5793f772675c985d7a14333310b95701 for a full test report.

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branfosj commented Feb 14, 2023

Going in, thanks @verdurin!

@branfosj branfosj merged commit 6e4f081 into easybuilders:develop Feb 14, 2023
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