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{bio}[GCC/11.3.0,GCCcore/11.3.0,foss/2022a] edlib v1.3.9, duplex-tools v0.3.1 w/ Python 3.10.4#17497

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casparvl merged 4 commits intoeasybuilders:developfrom
jfgrimm:20230310190950_new_pr_edlib139
Mar 14, 2023
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{bio}[GCC/11.3.0,GCCcore/11.3.0,foss/2022a] edlib v1.3.9, duplex-tools v0.3.1 w/ Python 3.10.4#17497
casparvl merged 4 commits intoeasybuilders:developfrom
jfgrimm:20230310190950_new_pr_edlib139

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@jfgrimm jfgrimm commented Mar 10, 2023

(created using eb --new-pr)

@jfgrimm jfgrimm added this to the 4.x milestone Mar 10, 2023
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jfgrimm commented Mar 10, 2023

Test report by @jfgrimm
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
node092.pri.viking.alces.network - Linux CentOS Linux 7.9.2009, x86_64, Intel(R) Xeon(R) Gold 6138 CPU @ 2.00GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/7fce69aa5e9ce446e3b6e041f5b594b1 for a full test report.

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casparvl commented Mar 14, 2023

Synced with develop, since an identical minimap2 was just merged 2 hours ago...

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casparvl commented Mar 14, 2023

@boegelbot please test @ generoso

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casparvl commented Mar 14, 2023

Test report by @casparvl
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
tcn260.local.snellius.surf.nl - Linux Rocky Linux 8.7, x86_64, AMD EPYC 7H12 64-Core Processor, Python 3.6.8
See https://gist.github.com/6311957341e407b0e27ba07f04627c73 for a full test report.

casparvl
casparvl requested changes Mar 14, 2023
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Comment thread easybuild/easyconfigs/d/duplex-tools/duplex-tools-0.3.1-foss-2022a.eb
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boegelbot commented Mar 14, 2023

@casparvl: Request for testing this PR well received on login1

PR test command 'EB_PR=17497 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17497 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 10465

Test results coming soon (I hope)...

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- notification for comment with ID 1467212316 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegelbot commented Mar 14, 2023

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/2bb2a769720a1fe8c4c00e1a16c71d0e for a full test report.

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casparvl commented Mar 14, 2023

@boegelbot please test @ jsc-zen2

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boegelbot commented Mar 14, 2023

@casparvl: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=17497 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_17497 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 2350

Test results coming soon (I hope)...

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- notification for comment with ID 1467218302 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegelbot commented Mar 14, 2023

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/4ad46b2bcc86a68339bc9bab726ee7d5 for a full test report.

jfgrimm
jfgrimm commented Mar 14, 2023
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Comment thread easybuild/easyconfigs/d/duplex-tools/duplex-tools-0.3.1-foss-2022a.eb Outdated
@casparvl casparvl changed the title {bio}[GCC/11.3.0,GCCcore/11.3.0,foss/2022a] edlib v1.3.9, minimap2 v2.24, duplex-tools v0.3.1 w/ Python 3.10.4 {bio}[GCC/11.3.0,GCCcore/11.3.0,foss/2022a] edlib v1.3.9, duplex-tools v0.3.1 w/ Python 3.10.4 Mar 14, 2023
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casparvl commented Mar 14, 2023

Test report by @casparvl
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
tcn499.local.snellius.surf.nl - Linux Rocky Linux 8.7, x86_64, AMD EPYC 7H12 64-Core Processor, Python 3.6.8
See https://gist.github.com/807fd9017ce280abf88c8320ce714875 for a full test report.

casparvl
casparvl approved these changes Mar 14, 2023
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Lgtm!

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casparvl commented Mar 14, 2023

Going in, thanks @jfgrimm!

@casparvl casparvl merged commit 0f257e2 into easybuilders:develop Mar 14, 2023
@casparvl casparvl modified the milestones: 4.x, next release (4.7.1) Mar 14, 2023
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