{chem,phys}[foss/2022a] M3GNet v0.2.4, pymatgen v2023.3.10 w/ Python 3.10.4 by smoors · Pull Request #17555 · easybuilders/easybuild-easyconfigs

smoors · 2023-03-17T07:29:35Z

(created using eb --new-pr)

depends on:

{lib}[foss/2022a] TensorFlow v2.11.0 w/ Python 3.10.4 (+ CUDA 11.7.0) #17241

…ss-2022a.eb

boegelbot · 2023-03-17T08:25:48Z

@smoors: Tests failed in GitHub Actions, see https://github.com/easybuilders/easybuild-easyconfigs/actions/runs/4445205191
Output from first failing test suite run:

ERROR: test_conflicts (test.easyconfigs.easyconfigs.EasyConfigTest)
Check whether any conflicts occur in software dependency graphs.
----------------------------------------------------------------------
Traceback (most recent call last):
  File "test/easyconfigs/easyconfigs.py", line 327, in test_conflicts
    self.assertFalse(check_conflicts(self.ordered_specs, modules_tool(), check_inter_ec_conflicts=False),
  File "test/easyconfigs/easyconfigs.py", line 279, in ordered_specs
    EasyConfigTest.resolve_all_dependencies()
  File "test/easyconfigs/easyconfigs.py", line 217, in resolve_all_dependencies
    cls._parsed_easyconfigs, modules_tool(), retain_all_deps=True)
  File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 463, in resolve_dependencies
    raise_error_missing_deps(totally_missing, extra_msg="no easyconfig file or existing module found")
  File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 326, in raise_error_missing_deps
    raise EasyBuildError(error_msg)
EasyBuildError: 'Missing dependencies: TensorFlow/2.11.0-foss-2022a (no easyconfig file or existing module found)'

======================================================================
ERROR: test_dep_graph (test.easyconfigs.easyconfigs.EasyConfigTest)
Unit test that builds a full dependency graph.
----------------------------------------------------------------------
Traceback (most recent call last):
  File "test/easyconfigs/easyconfigs.py", line 314, in test_dep_graph
    dep_graph(fn, self.ordered_specs)
  File "test/easyconfigs/easyconfigs.py", line 279, in ordered_specs
    EasyConfigTest.resolve_all_dependencies()
  File "test/easyconfigs/easyconfigs.py", line 217, in resolve_all_dependencies
    cls._parsed_easyconfigs, modules_tool(), retain_all_deps=True)
  File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 463, in resolve_dependencies
    raise_error_missing_deps(totally_missing, extra_msg="no easyconfig file or existing module found")
  File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 326, in raise_error_missing_deps
    raise EasyBuildError(error_msg)
EasyBuildError: 'Missing dependencies: TensorFlow/2.11.0-foss-2022a (no easyconfig file or existing module found)'

======================================================================
ERROR: test_dep_versions_per_toolchain_generation (test.easyconfigs.easyconfigs.EasyConfigTest)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "test/easyconfigs/easyconfigs.py", line 854, in test_dep_versions_per_toolchain_generation
    for ec in self.ordered_specs:
  File "test/easyconfigs/easyconfigs.py", line 279, in ordered_specs
    EasyConfigTest.resolve_all_dependencies()
  File "test/easyconfigs/easyconfigs.py", line 217, in resolve_all_dependencies
    cls._parsed_easyconfigs, modules_tool(), retain_all_deps=True)
  File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 463, in resolve_dependencies
    raise_error_missing_deps(totally_missing, extra_msg="no easyconfig file or existing module found")
  File "/opt/hostedtoolcache/Python/2.7.18/x64/lib/python2.7/site-packages/easybuild/tools/robot.py", line 326, in raise_error_missing_deps
    raise EasyBuildError(error_msg)
EasyBuildError: 'Missing dependencies: TensorFlow/2.11.0-foss-2022a (no easyconfig file or existing module found)'

----------------------------------------------------------------------
Ran 16628 tests in 1104.922s

FAILED (errors=3)
ERROR: Not all tests were successful

bleep, bloop, I'm just a bot (boegelbot v20200716.01)
Please talk to my owner @boegel if you notice me acting stupid),
or submit a pull request to https://github.com/boegel/boegelbot fix the problem.

…asyconfigs into 20230317082930_new_pr_M3GNet024

smoors · 2023-03-18T16:44:15Z

@boegelbot: please test @ generoso

boegelbot · 2023-03-18T16:45:08Z

@smoors: Request for testing this PR well received on login1

PR test command 'EB_PR=17555 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17555 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 10506

Test results coming soon (I hope)...

Details

- notification for comment with ID 1474906246 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2023-03-18T16:52:52Z

Test report by @boegelbot
FAILED
Build succeeded for 1 out of 3 (2 easyconfigs in total)
cns2 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/311bdf4e5006eb07500af27346a45034 for a full test report.

casparvl · 2023-03-20T17:18:04Z

@boegelbot please test @ generoso

boegelbot · 2023-03-20T17:20:09Z

@casparvl: Request for testing this PR well received on login1

PR test command 'EB_PR=17555 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17555 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 10516

Test results coming soon (I hope)...

Details

- notification for comment with ID 1476637351 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

casparvl · 2023-03-20T17:22:26Z

@boegelbot please test @ jsc-zen2

boegelbot · 2023-03-20T17:27:08Z

@casparvl: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=17555 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_17555 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

exit code: 0
output:

Submitted batch job 2388

Test results coming soon (I hope)...

Details

- notification for comment with ID 1476643700 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2023-03-20T17:28:40Z

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/b75ab421e7468861de3818a93abbf017 for a full test report.

casparvl · 2023-03-20T17:29:08Z

Test report by @casparvl
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
tcn480.local.snellius.surf.nl - Linux Rocky Linux 8.7, x86_64, AMD EPYC 7H12 64-Core Processor, Python 3.6.8
See https://gist.github.com/casparvl/f127ff074550af42a84873b3af596d94 for a full test report.

boegelbot · 2023-03-20T17:34:19Z

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/7572428c9069cdc6ce4b8cd2c28213ca for a full test report.

casparvl

Lgtm!

casparvl · 2023-03-20T19:25:12Z

Going in, thanks @smoors!

adding easyconfigs: M3GNet-0.2.4-foss-2022a.eb, pymatgen-2023.3.10-fo…

4111f71

…ss-2022a.eb

smoors added new update labels Mar 17, 2023

smoors mentioned this pull request Mar 17, 2023

mg3net vscentrum/vsc-software-stack#103

Closed

4 tasks

Merge branch 'develop' of https://github.com/easybuilders/easybuild-e…

ac9af7b

…asyconfigs into 20230317082930_new_pr_M3GNet024

casparvl requested changes Mar 18, 2023

View reviewed changes

Comment thread easybuild/easyconfigs/p/pymatgen/pymatgen-2023.3.10-foss-2022a.eb Outdated

downgrade sympy version

645a6b0

casparvl approved these changes Mar 20, 2023

View reviewed changes

casparvl added this to the next release (4.7.2?) milestone Mar 20, 2023

casparvl merged commit 3706029 into easybuilders:develop Mar 20, 2023

Conversation

smoors commented Mar 17, 2023 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

boegelbot commented Mar 17, 2023

Uh oh!

Uh oh!

smoors commented Mar 18, 2023

Uh oh!

boegelbot commented Mar 18, 2023

Uh oh!

boegelbot commented Mar 18, 2023

Uh oh!

casparvl commented Mar 20, 2023

Uh oh!

boegelbot commented Mar 20, 2023

Uh oh!

casparvl commented Mar 20, 2023

Uh oh!

boegelbot commented Mar 20, 2023

Uh oh!

boegelbot commented Mar 20, 2023

Uh oh!

casparvl commented Mar 20, 2023

Uh oh!

boegelbot commented Mar 20, 2023

Uh oh!

casparvl left a comment

Choose a reason for hiding this comment

Uh oh!

casparvl commented Mar 20, 2023

Uh oh!

Reviewers

Assignees

Labels

Projects

Milestone

Development

Uh oh!

3 participants

smoors commented Mar 17, 2023 •

edited

Loading