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symlink FastTreeMP to FastTree binary for FastTree 2.1.11#17897

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verdurin merged 2 commits intoeasybuilders:developfrom
smoors:20230510183628_new_pr_FastTree2111
May 15, 2023
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symlink FastTreeMP to FastTree binary for FastTree 2.1.11#17897
verdurin merged 2 commits intoeasybuilders:developfrom
smoors:20230510183628_new_pr_FastTree2111

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@smoors smoors commented May 10, 2023 •
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(created using eb --new-pr)

required for QIIME2

@smoors smoors added the bug fix label May 10, 2023
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smoors commented May 11, 2023

@boegelbot: please test @ generoso

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boegelbot commented May 11, 2023

@smoors: Request for testing this PR well received on login1

PR test command 'EB_PR=17897 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17897 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 10775

Test results coming soon (I hope)...

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Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegelbot commented May 11, 2023

Test report by @boegelbot
SUCCESS
Build succeeded for 4 out of 4 (4 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/73d64d3381a98762afedf60b5ecbbf3e for a full test report.

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lgtm

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smoors commented May 11, 2023

@boegelbot please test @ jsc-zen2

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boegelbot commented May 11, 2023

@smoors: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=17897 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_17897 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 2595

Test results coming soon (I hope)...

Details

- notification for comment with ID 1544095965 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegelbot commented May 11, 2023

Test report by @boegelbot
SUCCESS
Build succeeded for 4 out of 4 (4 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/a01926991b2abcec16c9344d7f1d93d5 for a full test report.

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verdurin commented May 15, 2023

Test report by @verdurin
SUCCESS
Build succeeded for 4 out of 4 (4 easyconfigs in total)
easybuild-c7.novalocal - Linux CentOS Linux 7.9.2009, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8
See https://gist.github.com/verdurin/5442d31532abe2eb2bfc23c37fec9862 for a full test report.

@verdurin verdurin added this to the next release (4.7.2) milestone May 15, 2023
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verdurin commented May 15, 2023

Going in, thanks @smoors!

@verdurin verdurin merged commit f24381f into easybuilders:develop May 15, 2023
@boegel boegel changed the title add missing FastTreeMP binary for FastTree symlink FastTreeMP to FastTree binary for FastTree 2.1.11 May 24, 2023
@smoors smoors deleted the 20230510183628_new_pr_FastTree2111 branch January 21, 2026 09:24
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