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add decoupleR package to R-bundle-Bioconductor 3.15 with foss/2022a as extension#18399

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casparvl merged 1 commit intoeasybuilders:developfrom
WilleBell:20230726153205_new_pr_R-bundle-Bioconductor315
Aug 8, 2023
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add decoupleR package to R-bundle-Bioconductor 3.15 with foss/2022a as extension#18399
casparvl merged 1 commit intoeasybuilders:developfrom
WilleBell:20230726153205_new_pr_R-bundle-Bioconductor315

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@WilleBell WilleBell commented Jul 26, 2023

(created using eb --new-pr)

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verdurin commented Jul 27, 2023

Test report by @verdurin
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
easybuild-c7.novalocal - Linux CentOS Linux 7.9.2009, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8
See https://gist.github.com/verdurin/7f06eb3dcc050f93fd2f66a3f1730878 for a full test report.

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verdurin commented Jul 28, 2023

@boegelbot please test @ generoso
EB_ARGS="--skip"

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boegelbot commented Jul 28, 2023

@verdurin: Request for testing this PR well received on login1

PR test command 'EB_PR=18399 EB_ARGS="--skip" EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_18399 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 11304

Test results coming soon (I hope)...

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Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegelbot commented Jul 28, 2023

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns2 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/8fa6b156ff0f9f94046cc1349924c903 for a full test report.

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verdurin commented Jul 28, 2023

@boegelbot please test @ jsc-zen2
EB_ARGS="--skip"

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boegelbot commented Jul 28, 2023

@verdurin: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=18399 EB_ARGS="--skip" /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_18399 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 3027

Test results coming soon (I hope)...

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- notification for comment with ID 1655455610 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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boegelbot commented Jul 28, 2023

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/d7f037ed423c33e9bd1a417d336d9241 for a full test report.

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casparvl commented Aug 7, 2023

Test report by @casparvl
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
tcn1.local.snellius.surf.nl - Linux RHEL 8.6, x86_64, AMD EPYC 7H12 64-Core Processor, Python 3.6.8
See https://gist.github.com/casparvl/219ff1adc35974570c6ef3467fda6d3b for a full test report.

casparvl
casparvl approved these changes Aug 8, 2023
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Lgtm!

@casparvl casparvl added the change label Aug 8, 2023
@casparvl casparvl added this to the next release (4.8.1?) milestone Aug 8, 2023
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casparvl commented Aug 8, 2023

Going in, thanks @WilleBell!

@casparvl casparvl merged commit fbc7a74 into easybuilders:develop Aug 8, 2023
@boegel boegel changed the title Add decoupleR package to R-bundle-Bioconductor easyconfig as extension add decoupleR package to R-bundle-Bioconductor 3.15 with foss/2022a easyconfig as extension Aug 8, 2023
@boegel boegel changed the title add decoupleR package to R-bundle-Bioconductor 3.15 with foss/2022a easyconfig as extension add decoupleR package to R-bundle-Bioconductor 3.15 with foss/2022a as extension Aug 8, 2023
@boegel boegel mentioned this pull request Aug 14, 2023
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@boegel boegel added enhancement and removed change labels Aug 15, 2023
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