{bio}[GCC/12.3.0,gfbf/2023a] rmats2sashimiplot v3.0.0, Pysam v0.22.0 by smoors · Pull Request #19659 · easybuilders/easybuild-easyconfigs

smoors · 2024-01-20T12:32:59Z

(created using eb --new-pr)

….0-GCC-12.3.0.eb

smoors · 2024-01-20T13:02:03Z

Test report by @smoors
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node383.hydra.os - Linux Rocky Linux 8.8, x86_64, Intel(R) Xeon(R) Gold 6132 CPU @ 2.60GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/smoors/7a00822b321dcb89bbc807c547b751a7 for a full test report.

smoors · 2024-01-20T16:53:01Z

@boegelbot: please test @ generoso

boegelbot · 2024-01-20T16:55:07Z

@smoors: Request for testing this PR well received on login1

PR test command 'EB_PR=19659 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_19659 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 12683

Test results coming soon (I hope)...

Details

- notification for comment with ID 1902173989 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2024-01-20T17:02:00Z

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/1d70a4323175e924745e13ea2db83d1c for a full test report.

smoors · 2024-11-08T16:08:14Z

@boegelbot: please test @ generoso

boegelbot · 2024-11-08T16:10:06Z

@smoors: Request for testing this PR well received on login1

PR test command 'EB_PR=19659 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_19659 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 14673

Test results coming soon (I hope)...

Details

- notification for comment with ID 2465132078 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2024-11-08T16:12:06Z

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns1 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/40cbdd345f32a41ba25ec53bd974ff85 for a full test report.

smoors · 2024-11-08T16:31:41Z

@boegelbot please test @ jsc-zen3

boegelbot · 2024-11-08T16:40:10Z

@smoors: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=19659 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_19659 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 5240

Test results coming soon (I hope)...

Details

- notification for comment with ID 2465220369 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2024-11-08T16:42:07Z

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.4, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.18
See https://gist.github.com/boegelbot/e34ee1566ed535466eae97a602f6be62 for a full test report.

…asyconfigs into 20240120133254_new_pr_rmats2sashimiplot300

lexming

LGTM

lexming · 2025-06-16T09:28:22Z

@boegelbot please test @ jsc-zen3

boegelbot · 2025-06-16T09:30:17Z

@lexming: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=19659 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_19659 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 6719

Test results coming soon (I hope)...

Details

- notification for comment with ID 2975777757 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2025-06-16T09:31:47Z

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsczen3c4.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.5, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.21
See https://gist.github.com/boegelbot/bd78751f17e6c18c047b7f425a8b762c for a full test report.

lexming · 2025-06-16T09:32:55Z

Merging, thanks @smoors !

adding easyconfigs: rmats2sashimiplot-3.0.0-gfbf-2023a.eb, Pysam-0.22…

1545247

….0-GCC-12.3.0.eb

smoors added new update labels Jan 20, 2024

remove Pysam

026f293

github-actions Bot removed the update label Nov 8, 2024

lexming added 3 commits November 22, 2024 15:53

Merge branch 'develop' of https://github.com/easybuilders/easybuild-e…

28bc17d

…asyconfigs into 20240120133254_new_pr_rmats2sashimiplot300

Merge branch 'develop' of https://github.com/easybuilders/easybuild-e…

39c10dc

…asyconfigs into 20240120133254_new_pr_rmats2sashimiplot300

remove deprecated parameters from rmats2sashimiplot-3.0.0-gfbf-2023a.eb

43ae4a6

lexming approved these changes Jun 16, 2025

View reviewed changes

lexming enabled auto-merge June 16, 2025 09:33

lexming added this to the next release (5.1.1?) milestone Jun 16, 2025

lexming merged commit b6ebc42 into easybuilders:develop Jun 16, 2025
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smoors commented Jan 20, 2024

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lexming commented Jun 16, 2025

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lexming commented Jun 16, 2025

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