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{tools}[foss/2023a] zUMIs v2.9.7 + add plyranges extension to R-bundle-Bioconductor v3.18#19949

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jfgrimm merged 2 commits intoeasybuilders:developfrom
pavelToman:20240221130237_new_pr_zUMIs297
Feb 22, 2024
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{tools}[foss/2023a] zUMIs v2.9.7 + add plyranges extension to R-bundle-Bioconductor v3.18#19949
jfgrimm merged 2 commits intoeasybuilders:developfrom
pavelToman:20240221130237_new_pr_zUMIs297

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(created using eb --new-pr)

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@boegelbot please test @ generoso

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@pavelToman: Request for testing this PR well received on login1

PR test command 'EB_PR=19949 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_19949 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 12932

Test results coming soon (I hope)...

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Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

@jfgrimm jfgrimm added this to the 4.x milestone Feb 21, 2024
Comment thread easybuild/easyconfigs/z/zUMIs/zUMIs-2.9.7-foss-2023a-R-4.3.2.eb
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jfgrimm commented Feb 21, 2024

@boegelbot: please test @ jsc-zen3

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@jfgrimm: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=19949 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_19949 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 3646

Test results coming soon (I hope)...

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- notification for comment with ID 1956892486 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/12d17f5d6804eb1685a8229de2032d13 for a full test report.

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Test report by @boegelbot
SUCCESS
Build succeeded for 4 out of 4 (2 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.3, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.18
See https://gist.github.com/boegelbot/9d5de469209c4fca056ec2dc607679c7 for a full test report.

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Test report by @verdurin
SUCCESS
Build succeeded for 3 out of 3 (2 easyconfigs in total)
easybuild-c7.novalocal - Linux CentOS Linux 7.9.2009, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8
See https://gist.github.com/verdurin/e9d206d547cd8d6bd578db8f3a598b2a for a full test report.

@jfgrimm jfgrimm modified the milestones: 4.x, release after 4.9.0 Feb 22, 2024
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jfgrimm commented Feb 22, 2024

Going in, thanks @pavelToman!

@jfgrimm jfgrimm merged commit 467fbd7 into easybuilders:develop Feb 22, 2024
@boegel boegel changed the title add plyranges to R-bundle-Bioconductor for zUMIs {tools} zUMIs v2.9.7 + add plyranges extension to R-bundle-Bioconductor v3.18 Feb 22, 2024
@boegel boegel changed the title {tools} zUMIs v2.9.7 + add plyranges extension to R-bundle-Bioconductor v3.18 {tools}[foss/2023a] zUMIs v2.9.7 + add plyranges extension to R-bundle-Bioconductor v3.18 Feb 22, 2024
@boegel boegel added enhancement and removed change labels Feb 28, 2024
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5 participants