{bio,devel,vis}[GCCcore/12.3.0] QuPath v0.5.0, Gradle v8.6, OpenSlide-Java v0.12.4 w/ Java 17 by PetrKralCZ · Pull Request #19962 · easybuilders/easybuild-easyconfigs

PetrKralCZ · 2024-02-23T13:52:51Z

(created using eb --new-pr)

…6.eb, OpenSlide-Java-0.12.4-GCCcore-12.3.0-Java-17.eb

PetrKralCZ · 2024-02-23T14:36:42Z

@boegelbot please test @ generoso

boegelbot · 2024-02-23T14:40:08Z

@PetrKralCZ: Request for testing this PR well received on login1

PR test command 'EB_PR=19962 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_19962 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 12954

Test results coming soon (I hope)...

Details

- notification for comment with ID 1961446798 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2024-02-23T14:47:25Z

Test report by @boegelbot
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
cns1 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/914bf3273c97ce67c54ecd484c69d8e0 for a full test report.

PetrKralCZ · 2024-02-23T20:44:43Z

@boegelbot please test @ generoso

boegelbot · 2024-02-23T20:45:08Z

@PetrKralCZ: Request for testing this PR well received on login1

PR test command 'EB_PR=19962 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_19962 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

exit code: 0
output:

Submitted batch job 12958

Test results coming soon (I hope)...

Details

- notification for comment with ID 1961966309 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2024-02-23T20:52:57Z

Test report by @boegelbot
SUCCESS
Build succeeded for 4 out of 4 (4 easyconfigs in total)
cns1 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/fd4ee96049ee38f9533e5a0273ee6f06 for a full test report.

boegel · 2024-02-27T17:24:50Z

Test report by @boegel
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
node3129.skitty.os - Linux RHEL 8.8, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, Python 3.6.8
See https://gist.github.com/boegel/ff1715590058c810c7e2e28bf836fd43 for a full test report.

boegel · 2024-02-27T17:27:11Z

@boegelbot please test @ jsc-zen3

boegelbot · 2024-02-27T17:30:07Z

@boegel: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=19962 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_19962 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 3685

Test results coming soon (I hope)...

Details

- notification for comment with ID 1967253115 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegelbot · 2024-02-27T17:35:23Z

Test report by @boegelbot
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
jsczen3c2.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.3, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.18
See https://gist.github.com/boegelbot/a2b1c0d68889742639510ca019389f55 for a full test report.

boegel · 2024-02-27T18:40:05Z

Going in, thanks @PetrKralCZ!

adding easyconfigs: QuPath-0.5.0-GCCcore-12.3.0-Java-17.eb, Gradle-8.…

ea5111a

…6.eb, OpenSlide-Java-0.12.4-GCCcore-12.3.0-Java-17.eb

PetrKralCZ added new update labels Feb 23, 2024

PetrKralCZ mentioned this pull request Feb 23, 2024

QuPath vscentrum/vsc-software-stack#51

Closed

PetrKralCZ added 2 commits February 23, 2024 15:08

add missing build dep

525d607

add missing build dep

c95cfdd

boegel requested changes Feb 23, 2024

View reviewed changes

apply chages suggested in PR

1d1f205

remove easyconfig for Gradle 8.6 without Java versionsuffix

79eaae5

boegel requested changes Feb 27, 2024

View reviewed changes

Comment thread easybuild/easyconfigs/g/Gradle/Gradle-8.6-Java-17.eb Outdated

Comment thread easybuild/easyconfigs/q/QuPath/QuPath-0.5.0-GCCcore-12.3.0-Java-17.eb

Comment thread easybuild/easyconfigs/q/QuPath/QuPath-0.5.0-GCCcore-12.3.0-Java-17.eb Outdated

trivial code style changes in Gradle and QuPath easyconfigs

76a3ea4

boegel requested changes Feb 27, 2024

View reviewed changes

Comment thread easybuild/easyconfigs/q/QuPath/QuPath-0.5.0-GCCcore-12.3.0-Java-17.eb Outdated

QuPath binary is named QuPath, not qupath

0890200

boegel added this to the 4.x milestone Feb 27, 2024

boegel approved these changes Feb 27, 2024

View reviewed changes

boegel merged commit 76c126a into easybuilders:develop Feb 27, 2024

boegel modified the milestones: 4.x, release after 4.9.0 Mar 17, 2024

Conversation

PetrKralCZ commented Feb 23, 2024

Uh oh!

PetrKralCZ commented Feb 23, 2024

Uh oh!

boegelbot commented Feb 23, 2024

Uh oh!

boegelbot commented Feb 23, 2024

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PetrKralCZ commented Feb 23, 2024

Uh oh!

boegelbot commented Feb 23, 2024

Uh oh!

boegelbot commented Feb 23, 2024

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boegel commented Feb 27, 2024

Uh oh!

boegel commented Feb 27, 2024

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boegelbot commented Feb 27, 2024

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boegelbot commented Feb 27, 2024

Uh oh!

boegel commented Feb 27, 2024

Uh oh!

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